Pairwise Alignments

Query, 370 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 75/338 (22%), Positives = 146/338 (43%), Gaps = 13/338 (3%)

Query: 38  VTYLRQIADQAAELGVDTVAWLAISDLKQDDLADASAVVAVEKFGELITRAVSLSRETGF 97
           V +++ +++   ELG D    L    L    L++A A +++ ++  +   A+ +S E   
Sbjct: 13  VGFVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAAL 72

Query: 98  GVLAGRRLLTATHGVLGMAAAASRSIREAMQIVERFVCIRTEAISIHTREVNGSLEVW-- 155
           G+  GR    A  G+ G+ AA + ++ EA + + RF  +       H+R    +   W  
Sbjct: 73  GLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDAQGAWLR 132

Query: 156 FEPAIGLGSASNTVTEIAMVAVKNIADDIFLSRSACNMVYFQFPEPPHAALARGVYGCAV 215
           F         +  V +  +        ++  +      +  +F  P +AA  + +    V
Sbjct: 133 FYSISPYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQPLCSTPV 192

Query: 216 RYNQKWSGLSFDISAAEEVTQKYDPLVLTEAVRFCVEELNETGDNRSAGSKLEKIVLERL 275
           ++    + L    +  +     + P      ++ C  EL +    RS G ++  +    L
Sbjct: 193 QFAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERITHL----L 248

Query: 276 PPI------PHLTVCARLLSTTPRTLHRRLIEEGTSYREIVESIRHRMALKLLRKGS-SI 328
            P+      P L   A  L     TL R+L EEGT +R+++   R  +A   +R  + + 
Sbjct: 249 GPLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAF 308

Query: 329 KEVTYFLGYADIASFRRAFRRWEGMAPSDWTTRVQEPA 366
            E+ Y LG+A   +F+RAF+RW G+ P ++    ++P+
Sbjct: 309 GEIAYLLGFASAEAFQRAFKRWTGLTPGEFRRSQRQPS 346