Pairwise Alignments

Query, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 463 a.a., transporter from Pseudomonas simiae WCS417

 Score =  327 bits (839), Expect = 4e-94
 Identities = 179/455 (39%), Positives = 270/455 (59%), Gaps = 1/455 (0%)

Query: 34  LVVLAVLSGCASLAPALDPIALPVASNWRTQPDTPGVAAAADLAWRAYFTDPALQALIET 93
           L+    L GC +LAP  +    PV+  W    + P     AD+ W+ +FTD  L  L + 
Sbjct: 7   LLAAMALGGCVNLAPQYERPEAPVSEQWLPAANLPKGKVGADIKWQQFFTDRRLAQLQQL 66

Query: 94  ALENNRDLRVALLRTEEASAAFRIQRAQQAPMVGVGVQQIRAGLPDGLQPLAGRSVLEVN 153
           AL NNRDLR+A L  E+A A +RI+RA   P V  GV    +  P  L            
Sbjct: 67  ALANNRDLRLASLNVEKAQAQYRIKRADLFPTVDAGVSGTHSRTPGSLSNTGTAVTTHDY 126

Query: 154 AASVGISSWELDLWGRVRSMKTAAFEQWLATGQGHRAVELALIAQVADAYLGLRELDERI 213
           +A +G+SS+ELD++GRVR+++  A E +LA  +  R+ +++L+A+VA A+L L   +ER+
Sbjct: 127 SAQLGLSSYELDVFGRVRNLRDEALEDYLALTETRRSTQISLVAEVATAWLTLAADNERL 186

Query: 214 ALARRTVENQQSLAQIFQKRFELGHGSRLELTQVRTLLSQGKALQVQLELQREQQRNALA 273
            LA+ T+ +Q +   + Q+ + LG  S L + Q +T +   +      E Q  Q RNAL 
Sbjct: 187 LLAQETLTSQLATYDLTQRSYALGGSSALSVAQAQTTVESARGDVASYESQILQDRNALR 246

Query: 274 LLLGSE-PQLPPPSAPMDEALVMPELVHGLPSDLLLNRPDILAAEHALRARQANIGAARA 332
           LL+GS+ P+   P   ++ A V+ ++  GLPS LL  RPD+L+AEH L++   +IGAARA
Sbjct: 247 LLVGSDLPEALLPGTRLESAAVLVDIPAGLPSSLLQQRPDVLSAEHTLKSANIDIGAARA 306

Query: 333 AFFPRIALTGGAGTVSTSLSDLFSSGTRAWLFQPTIELPIFDAGMRQANLDVSVVRRDIA 392
           AF+P I+LT  AG+ S++L+ LF SG+ AW F P+I +PIFD G  +A LD + V R+I 
Sbjct: 307 AFYPSISLTANAGSSSSALAGLFKSGSGAWTFAPSISVPIFDGGSNRATLDSAKVEREIQ 366

Query: 393 IAEYERAIQAAFRDVSDALAARQKLAEQLAVARQAHAAQTERLKLARMLFDAGSAAHLEV 452
           +  Y++ +Q AFR+V+DALA R  L  ++A  +    A  +  +L+  L+  GS ++LE 
Sbjct: 367 LQTYQQTLQTAFREVADALAVRSTLDRRIAAQQALTDASRKSFELSDALYRGGSQSYLEA 426

Query: 453 LDAERDLLAVAQQLVQVRKAALSSQIGLYAALGGG 487
           LDA+R L +  Q L+ +R    S++I LY  LGGG
Sbjct: 427 LDAQRSLYSAQQDLITLRLTEQSNRITLYKVLGGG 461