Pairwise Alignments

Query, 390 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

Subject, 399 a.a., CAIB/BAIF family protein from Pseudomonas putida KT2440

 Score =  138 bits (348), Expect = 2e-37
 Identities = 116/403 (28%), Positives = 185/403 (45%), Gaps = 34/403 (8%)

Query: 4   PLSGIRVLELPAIGPAPFCGALLADMGADVVRIDRASASAIDIGTPVPPRFDFYN----- 58
           PL+G++V+EL  +   PF   + A+ GA+VV+++       D G P+      Y      
Sbjct: 7   PLAGLKVVELGTLIAGPFASRICAEFGAEVVKVESP-----DGGDPLRKWRKLYEGTSLW 61

Query: 59  -----RNKRSVALDLKSRGAVDAALQLVRRADILIEGFRPGVAERLGLGPDECLGANPRL 113
                RNK+S+ L+LK     D   +L+  ADILIE FRPGV E+LGLG D     NPRL
Sbjct: 62  WFVQARNKQSLTLNLKHPEGRDILKRLLAEADILIENFRPGVLEKLGLGWDVLHALNPRL 121

Query: 114 VYGRMTGWGQDGPLAQAVGHDINYLALSGALHCIGEKGRPPVPPLNLAADLGGGAMYLAV 173
           V  R++G+GQ GP+    G      ++ G  +  G   RPPV    ++      A++  +
Sbjct: 122 VMVRLSGFGQTGPMKDQPGFGAVGESMGGLRYITGFDDRPPV-RTGISIGDSIAALWGVI 180

Query: 174 GVLAALSEAR-SSGRGQVVDAAMVDGLANLMSAFSAFRQMGDWTAERGENIVDGGAPFYG 232
           G L AL     + G+GQVVD A+ + +  +M +      +  +  ER  NI+ G  P   
Sbjct: 181 GALMALRHREVNGGQGQVVDVALYEAIFAMMESMVPEFDVFGFIRERTGNIMPGITP-SS 239

Query: 233 TYETRDGKYVAVGAIEARFYRALLAGIGLDAAQLPP---QND-----RASWPAVRQRFAE 284
            + + DGK+V +GA     ++  +  IG D     P    ND     R     V  R+A 
Sbjct: 240 IHTSADGKHVQIGANGDAIFKRFMQAIGRDDLANDPTLASNDGRDLRRDELYGVIDRWAN 299

Query: 285 VFIARTRDEWVEAMRGRDACLSPVLDLDEAPQDVHMQARAVFTRF---DGVVH--PSPAP 339
              +   ++ ++ +   +   S +   ++   D    AR +F +    DG     P   P
Sbjct: 300 ---SLPLEQLMQVLTTAEVPASRIYSAEDMFNDPQYLAREMFLQAKLPDGKPFHMPGIVP 356

Query: 340 RFARTPSALQRPAPAPGAQSSEVLAEWGVPPQDIEALRRSGAM 382
           + + TP + +   PA G  +  +L   G     I +LR +G +
Sbjct: 357 KLSETPGSSEWVGPALGEHTEALLGSLGYDAAAIASLRAAGTV 399