Pairwise Alignments

Query, 382 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

Subject, 410 a.a., CAIB/BAIF family protein from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 2e-39
 Identities = 122/408 (29%), Positives = 188/408 (46%), Gaps = 46/408 (11%)

Query: 3   PLQGIKVVEMAGLAPGPFAAMMLADMGAQVLRIERPGQVSPPGHPRLAL----------L 52
           PL GI+VV+ +    GP+    LA +GA+V+++ERPG           L          L
Sbjct: 6   PLAGIRVVDYSHFLAGPYVGRCLAALGAEVIKVERPGSGDAGRQHAFTLDDQQSGYFLQL 65

Query: 53  DRSRSAVALDLKSAAGLATLRRLLNGADAFIEGFRPGVMERLGLGPEPCLAANPKLVYGR 112
           +  +  V++++K   G A ++RL + AD FIE +RPG +++LGLG     A NP+LVY  
Sbjct: 66  NMGKQGVSVNMKDPRGKAFMQRLTDSADVFIENYRPGALDKLGLGYAELSARNPRLVYCS 125

Query: 113 MTGWGQSGPLAKAAGHDINYIALTGALHSIGRQG-APPAVPLNLVGDFGGGGMYLAFGIV 171
           ++ +G +GP A  AG  +   A +G +  +G  G APP + ++L GD    G++    I 
Sbjct: 126 ISAYGHTGPDAHRAGFGLIAEAKSGIMQMVGVPGEAPPLLRISL-GDM-YTGIHAVAAIN 183

Query: 172 CALLEVRQSGQGQVVDAAMVDGAASLMTYMYASHAAGAWSDVRGENVLDGDTAPWYGVYE 231
            ALL    SG+GQ +D A+ D   S+  Y    +     + +  +   D  T+  YGV+ 
Sbjct: 184 AALLGRVSSGRGQHIDMALYDTLVSMHEYAVQCYTLSGGTVLPQQTGHDMPTSTLYGVFR 243

Query: 232 TADGQYVSIASAEP--QFYAELL-------------RITGLAGGDLPDQLDRA---SWPV 273
             DG  V  A  +   Q +A +L             R  GL G +   +   A    W V
Sbjct: 244 ATDGDLVIAAQVDDAWQRFAAMLEANGGPPGFGSDRRYHGLNGRNAHREAILAVVRDW-V 302

Query: 274 FRLRLAEIFRSRTRDAWCELMEGSDVCFAPVLTLDEAMAHPHNRARGTFVEVA----GVA 329
              R+AEI           L++G D+  A V  +DE +A P  +AR   +E      G  
Sbjct: 303 GARRVAEIL---------ALLDGIDIPSAKVQRIDEVLADPQIQARNMVIEQQHPRYGTL 353

Query: 330 QPAPAP-RFSRTVPATPTLPEAAAADPTGALSNWGFAPHEVAALRAEG 376
           + A  P RFS        +            +  GF+P E+ AL+A+G
Sbjct: 354 RLANLPFRFSDCDTTIHQVAPDLGQHNAEVAAGLGFSPEEITALQADG 401