Pairwise Alignments

Query, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 562 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

 Score =  193 bits (490), Expect = 2e-53
 Identities = 164/527 (31%), Positives = 237/527 (44%), Gaps = 67/527 (12%)

Query: 35  GQSLDYAALDAQMDRVAAALQRD-GLKPGDVIAISAATSLGYAVVFLGAVRAGVAVAPLA 93
           G +L YA L+ Q    A  LQ+   LKPGD IA+     L Y +   GA+RAG+ V    
Sbjct: 47  GITLTYAELERQSAAFAGYLQQHTDLKPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTN 106

Query: 94  PDSTPEGLAAMVADSGVQLFFVDEAVG---QATAGTPGVPRIALDDSGVGAPLS-GWL-- 147
           P  TP  +     D+GV+        G   Q       +  +     G   P + GWL  
Sbjct: 107 PLYTPREMRHQFKDAGVRALVYLNLFGSRVQEVCSDTEIDYLIEARMGDFMPTAKGWLVN 166

Query: 148 ----------------------------APAGAQPEPVRLQPDAPFNIIYSSGTTGTPKG 179
                                       A  G    PV L   A     Y+ GTTG  KG
Sbjct: 167 TLVDKVKKMVPAYSLPRAVAFKRALHMGAGLGVTRHPVTLDDIAVLQ--YTGGTTGLAKG 224

Query: 180 IMMPHAFRWAQVKLFTSL--GYGPDA---------VTLVSIPLYS--NMTLSSFFPALSL 226
            M+ H    A ++   +     G D          V +  +PLY     T +     +S 
Sbjct: 225 AMLTHGNLVANMQQVRACMSQTGDDGHPLIKEGQEVMIAPLPLYHIYAFTANCMCMMVSG 284

Query: 227 GAKVVLMRKFDAGGYLELAQAHRATHSMMVPVQFQRIMAWPDFDRYDLSSFRMKSCGSAP 286
              V++    D GG+++  +  R T  + +   F  +M  PDF   D S  ++ + G   
Sbjct: 285 NHNVLITNPRDIGGFIKELKKWRFTGLLGLNTLFVALMDHPDFKSLDFSHLKLTNSGGT- 343

Query: 287 FPVALKADVLARWPG----GLTEYYGMTEGGGVCALPAHERPDKLHTVGKPAPGHDMRVI 342
              AL      RW       + E YG+TE   V +   +    +L TVG P P   M+VI
Sbjct: 344 ---ALIKATAERWQQITGCAIGEGYGLTETSPVASTNPYGNKSRLGTVGIPVPATAMKVI 400

Query: 343 DDEGRELPRGDIGEIVGRSGTMMVGYHNLPQKTAEAEWFDAEGRRFIRSGDTGRFDEDGY 402
           DD G ELP G+ GE+  +   +M GY   P+ TAEA   DAEG  ++++GD    DE+G+
Sbjct: 401 DDHGVELPLGERGELCIKGPQVMKGYWQQPEATAEA--LDAEG--WLKTGDIAVIDEEGF 456

Query: 403 LVLLDRKKDMIISGGFNVYPVDLEAVLRSHPDVDEAAVFGVPSQRWGESPMACVVLREAA 462
           + ++DRKKD+II  GFNVYP ++E V+ +HP V   AV GVP +R GE+    VV R A 
Sbjct: 457 VSIVDRKKDLIIVSGFNVYPNEIEDVVMAHPAVANCAVIGVPDERTGEAVKLFVVAR-AE 515

Query: 463 TVAPDALREWANERLG--KAQRLVDLRVVQSLPRSDIGKVLKRQLRN 507
            V+ + L+ +        K  + + LR   SLP + +GK+L+R+LR+
Sbjct: 516 GVSLEELKAYCKTNFTGYKVPKHIVLR--DSLPMTPVGKILRRELRD 560