Pairwise Alignments

Query, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

 Score =  192 bits (488), Expect = 3e-53
 Identities = 168/549 (30%), Positives = 247/549 (44%), Gaps = 63/549 (11%)

Query: 11  FGTVAELIHAHALRDAAHTALLLDGQSLDYAALDAQMDRVAAALQRD-GLKPGDVIAISA 69
           + +V E+      R A   A    G +L YA L+      AA LQ+   LKPG+ IA+  
Sbjct: 23  YASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFAAWLQQHTDLKPGERIAVQM 82

Query: 70  ATSLGYAVVFLGAVRAGVAVAPLAPDSTPEGLAAMVADSGVQLFFVDEAVG---QATAGT 126
              L Y +   GA+RAG+ V    P  T   +     DSG +        G   Q     
Sbjct: 83  PNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGARALVYLNMFGKRVQEVLPD 142

Query: 127 PGVPRIALDDSGVGAPLS-GWLA-----------PA-----------------GAQPEPV 157
            G+  +     G   P + GWL            PA                 G  P+PV
Sbjct: 143 TGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYRLPQAVPFKQVLREGRGLSPKPV 202

Query: 158 RLQPDAPFNIIYSSGTTGTPKGIMMPHAFRWAQVK--LFTSLGYGPDA---------VTL 206
            L  D    + Y+ GTTG  KG M+ H    A +   L     +GPD          V +
Sbjct: 203 SLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACFSQHGPDGQKLLKDGQEVMI 262

Query: 207 VSIPLYS--NMTLSSFFPALSLGAKVVLMRKFDAGGYLELAQAHRATHSMMVPVQFQRIM 264
             +PLY     T +     ++    V++    D  G+++     R +  + +   F  +M
Sbjct: 263 APLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALM 322

Query: 265 AWPDFDRYDLSSFRMKSCGSAPFPVALKADVLARWPG----GLTEYYGMTEGGGVCALPA 320
             P F + D S+ ++ + G      AL      RW       + E YG+TE   V +   
Sbjct: 323 DHPGFRQLDFSALKVTNSGGT----ALVKATAERWEDLTGCRIVEGYGLTETSPVASTNP 378

Query: 321 HERPDKLHTVGKPAPGHDMRVIDDEGRELPRGDIGEIVGRSGTMMVGYHNLPQKTAEAEW 380
           + +  +L TVG P  G   +VIDD+G ELP G+ GE+  +   +M GY   P+ TA+A  
Sbjct: 379 YGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGPQVMKGYWQQPEATAQA-- 436

Query: 381 FDAEGRRFIRSGDTGRFDEDGYLVLLDRKKDMIISGGFNVYPVDLEAVLRSHPDVDEAAV 440
            DAEG  + ++GD    D DG+  ++DRKKDMII  GFNVYP ++E V+  HP V   A 
Sbjct: 437 LDAEG--WFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIEDVVMGHPKVANCAA 494

Query: 441 FGVPSQRWGESPMACVVLREAATVAPDALREW--ANERLGKAQRLVDLRVVQSLPRSDIG 498
            GVP +R GE+    VV RE   ++ D L+ +  AN    K  + + LR  +SLP + +G
Sbjct: 495 IGVPDERSGEAVKLFVVPREGG-LSVDELKAYCKANFTGYKVPKHIVLR--ESLPMTPVG 551

Query: 499 KVLKRQLRN 507
           K+L+R+LR+
Sbjct: 552 KILRRELRD 560