Pairwise Alignments

Query, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 565 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

 Score =  168 bits (425), Expect = 5e-46
 Identities = 159/550 (28%), Positives = 244/550 (44%), Gaps = 60/550 (10%)

Query: 5   ELLAQDFGTVAELIHAHALRDAAHTALLLDGQSLDYAALDAQMDRVAAALQRD-GLKPGD 63
           E+   +F  +  ++     R A   A    G+++ Y  L A     AA LQ+   LKPGD
Sbjct: 17  EINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSGAFAAWLQQHTDLKPGD 76

Query: 64  VIAISAATSLGYAVVFLGAVRAGVAVAPLAPDSTPEGLAAMVADSGVQLFFVDEAVGQAT 123
            IA+     L Y V   GA+RAG+ V    P  T   +     DSG +          A 
Sbjct: 77  RIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVC--LANMAH 134

Query: 124 AGTPGVPR------IALDDSGVGAPLSGWL-----------APAGAQPEPVRL------- 159
                VP+      I  + + +  PL   L            PA   P+ VR        
Sbjct: 135 LAEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYNLPQAVRFNDALALG 194

Query: 160 --QPDAPFN--------IIYSSGTTGTPKGIMMPHAFRWAQV----KLFTSLGYGPDAVT 205
             QP    N        + Y+ GTTG  KG M+ H    A +     L  S  +    + 
Sbjct: 195 KGQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLHEGCEIL 254

Query: 206 LVSIPLYSNMTLSSFFPALSL--GAKVVLMRKFDAGGYLELAQAHRATHSMMVPVQFQRI 263
           +  +PLY     +    A+ L     V++    D    ++     + +  + +   F  +
Sbjct: 255 ITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWKFSGFVGLNTLFVAL 314

Query: 264 MAWPDFDRYDLSSFRMKSCGSAPFPVALKADVLARWPG----GLTEYYGMTEGGGVCALP 319
                F   D S+ ++   G     +AL+  V  RW       + E YGMTE   V A+ 
Sbjct: 315 CNNEAFRALDFSALKITLSGG----MALQLSVAERWKAVTGCAICEGYGMTETSPVAAVN 370

Query: 320 AHERPDKLHTVGKPAPGHDMRVIDDEGRELPRGDIGEIVGRSGTMMVGYHNLPQKTAEAE 379
             E  +++ T+G P P    +VIDD G ELP G++GE+  +   +M GY    ++ A AE
Sbjct: 371 PSEA-NQVGTIGIPVPSTLCKVIDDAGNELPLGEVGELCVKGPQVMKGYWQ--REDATAE 427

Query: 380 WFDAEGRRFIRSGDTGRFDEDGYLVLLDRKKDMIISGGFNVYPVDLEAVLRSHPDVDEAA 439
             D+EG  ++++GD      DGY+ ++DRKKDMI+  GFNVYP +LE VL + P V + A
Sbjct: 428 ILDSEG--WLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCA 485

Query: 440 VFGVPSQRWGESPMACVVLREAATVAPDALREW--ANERLGKAQRLVDLRVVQSLPRSDI 497
             GVP ++ GE     +V++   TV  + + E   AN    K  R ++ R   SLP +++
Sbjct: 486 AIGVPDEKSGEVIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRHIEFR--DSLPTTNV 543

Query: 498 GKVLKRQLRN 507
           GK+L+R+LR+
Sbjct: 544 GKILRRELRD 553