Pairwise Alignments

Query, 393 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 407 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 91/380 (23%), Positives = 153/380 (40%), Gaps = 13/380 (3%)

Query: 1   MIKKLLAAAAAAVVLQSGALAQNA--------IKLGVVNIDTGPFA-VSGAFVNDGAAFA 51
           M  K LA   AA +L S  +A  A        +K+GV+   +G ++ ++G+   + A  A
Sbjct: 1   MKTKALAVPFAAALLASAMMAGPAAAQYAGGGVKIGVLTDMSGAYSDLAGSGSVEAAKMA 60

Query: 52  VEQLNAQGGALGRKYELVTQNHAGTPASAIAAATRLVEQQGVSFFTGLNPSGTSLAIASK 111
           +E         G+  ELV+ +H      A A A +  + Q V     +N S  +LA+   
Sbjct: 61  IEDFGKPIN--GKPVELVSADHQNKADIASATARKWYDTQDVDAIFDINGSVAALAVREV 118

Query: 112 MPGLNALFIDATAASDDLTGKNCGANYFRVGITDGMMVNSFREQTKASGIKNWDLLMADI 171
                 + I++ AAS  LT K C             +         + G K W  + AD 
Sbjct: 119 AKEKGKVDINSGAASMSLTNKACSPTGLHWTYDVYSLAAGTGNALVSEGFKTWYFITADY 178

Query: 172 AVGHDTAKRFAAAMQESGGKVNKTLFAPITASDLGSYIAQLLDKPADGLLMYYPSSGGIA 231
             GHD   + A  ++E GG V  ++  P   SD+ SY+ Q     A  + M    S  I 
Sbjct: 179 TFGHDLENQVAKIVKEKGGTVKGSVAHPFGTSDVSSYLLQAQASGAKIIAMANAGSDTIN 238

Query: 232 LVKQQQAFKLFEKYKTVLSASMVNEILIGAHGDASVGLWSAQSYFWSMPGDRNAAFVKAF 291
            +KQ + F + +  +T+ +  +    +     +A+ G+     ++W    D+  AF K F
Sbjct: 239 TIKQAREFGITQGGQTLAALLLFLTDIHSVGLEAAQGMVLTTGFYWD-TDDKTRAFSKRF 297

Query: 292 EARYKRK-PTYIDADAYMSFELVHQAILKAKSADVPAVRAALSGLKASTVVGDVEMRAAD 350
             R   K PT + A  Y S     +A   A + +   V A +  L    +         D
Sbjct: 298 AQRMNGKMPTMVHAGVYSSVLHYLKAAEAAGTDEGEKVIAKMRELPIDDMFAKNGKIRPD 357

Query: 351 HQLLRPLVVVQAAKASEGKG 370
            +++  + + +     E KG
Sbjct: 358 GRMVHDMYLAKVKSPKESKG 377