Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 283 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  182 bits (463), Expect = 6e-51
 Identities = 106/277 (38%), Positives = 156/277 (56%), Gaps = 2/277 (0%)

Query: 7   FNIAQLANALALASLLTILASGLALIFGLRDVMNFGHGALFMLGAYLGYTFSGLFNFWAA 66
           F I    N+ A  ++L +LA G +LIFGL  V N  HGALFMLG Y+  +  GL  F  A
Sbjct: 2   FWINGFLNSFAFGAILFLLAVGFSLIFGLMRVANLAHGALFMLGGYIATSAMGL-GFAGA 60

Query: 67  LVIVPLLLALLGVLFEYAAIRPLQRRSHMDVALVTFGLALILSQVVIKVWGTAPLSVSAP 126
           ++      A+ G + E   IR L  R    V L T GLA I++   + VW   P++  AP
Sbjct: 61  VLAAGAACAVFGGILERTLIRRLAGRELAQV-LGTLGLAFIIADQCLLVWSGDPIAQPAP 119

Query: 127 PSLAGSLDLFGHAYPAYRIFLIAMGFGTCVLLAAWLKWTRSGMHVRAVSQQPMVARMMGV 186
            +L G++   G  +PAYR+ L+A+     V + A ++ T  G  +RA      +AR MG+
Sbjct: 120 EALRGAVGFGGIVFPAYRLALVALALVAFVGIWALVERTTLGARIRAAVDDREMARAMGI 179

Query: 187 NTDRLSLLVVCLGTGFAGLAGVLAGPYLSVDPAMGASILISCLIVVVIGGLGSIGGAIAA 246
              RL   V CLG G AG+ G LA P +SV P + + +L   L+VV++GG+GS+ GA+A 
Sbjct: 180 PVSRLFTTVFCLGAGLAGIGGALAAPIMSVYPGLDSEMLPLALLVVILGGIGSLTGALAG 239

Query: 247 AVVFGLIQVIGALISPTLAVMAPYMLLFIVLLWRPQG 283
           ++V GL+   G ++ P LA +  ++ + +VL  RPQG
Sbjct: 240 SLVIGLVYTFGQMLLPDLAYVILFLPMVVVLAVRPQG 276