Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  191 bits (484), Expect = 2e-53
 Identities = 112/277 (40%), Positives = 154/277 (55%), Gaps = 5/277 (1%)

Query: 11  QLANALALASLLTILASGLALIFGLRDVMNFGHGALFMLGAYLGYTFSGLF-NFWAALVI 69
           QL N L L  +  ++A GL +IFGL + +NF HGA F+LGAYL YT   +  NFW AL+I
Sbjct: 8   QLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNFWLALLI 67

Query: 70  VPLLLALLGVLFEYAAIRPLQRRSHMDVALVTFGLALILSQVVIKVWGTAPLSVSAPPSL 129
            PL++A L    E   I+ +    H    LVT G+ALI+ +  + +WG    +++ PP L
Sbjct: 68  APLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIAVPPEL 127

Query: 130 AGSLDLFGHAYPAYRIFLIAMGFGTCVLLAAWL--KWTRSGMHVRAVSQQPMVARMMGVN 187
            G L L    YP YR+FLI  GF   + +  WL  + TR G  VRA S+      ++G N
Sbjct: 128 RGVLILGDFIYPYYRLFLI--GFAALIGIGLWLLLERTRFGALVRAGSESTETVSLLGTN 185

Query: 188 TDRLSLLVVCLGTGFAGLAGVLAGPYLSVDPAMGASILISCLIVVVIGGLGSIGGAIAAA 247
             RL  L   LG G AG+AGVL  P     P +G  IL    +VVVIGG+GS GGA+   
Sbjct: 186 IFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGGALVGG 245

Query: 248 VVFGLIQVIGALISPTLAVMAPYMLLFIVLLWRPQGL 284
           ++ G++Q +   + P  A +  Y  +  V+L RP GL
Sbjct: 246 LLVGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGL 282