Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 295 a.a., branched chain amino acid ABC transporter permease from Agrobacterium fabrum C58

 Score =  179 bits (453), Expect = 9e-50
 Identities = 103/279 (36%), Positives = 153/279 (54%), Gaps = 4/279 (1%)

Query: 9   IAQLANALALASLLTILASGLALIFGLRDVMNFGHGALFMLGAY---LGYTFSGLFNFWA 65
           + QL   L   S   +L+ GLA+IFGL  V+NF HGA +MLGA+   LG  + G+ NFW 
Sbjct: 13  LGQLLIGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMLGAFVAFLGLQYFGI-NFWM 71

Query: 66  ALVIVPLLLALLGVLFEYAAIRPLQRRSHMDVALVTFGLALILSQVVIKVWGTAPLSVSA 125
           AL++ PL++AL G + E   +  L     +   L TFGLAL++      ++G A    S 
Sbjct: 72  ALIVTPLVVALFGAIVERFMLSRLYDLDPLYGLLFTFGLALVVEGTFRWLYGAAGQPYSV 131

Query: 126 PPSLAGSLDLFGHAYPAYRIFLIAMGFGTCVLLAAWLKWTRSGMHVRAVSQQPMVARMMG 185
           P  LAG  +L     P YR F++ +    C+   A ++ TR G ++RA ++ P + +  G
Sbjct: 132 PRELAGGTNLGFMFLPNYRAFVVVISLVACIATWALIEKTRLGSYLRAATENPTLVQAFG 191

Query: 186 VNTDRLSLLVVCLGTGFAGLAGVLAGPYLSVDPAMGASILISCLIVVVIGGLGSIGGAIA 245
           +N   L  L   LG G AG  GVLA P   V P MG +++I    VVV+GG+GSI GAI 
Sbjct: 192 INVPVLLTLTYALGAGLAGFTGVLAAPIYQVSPLMGTNLIIVVFAVVVVGGMGSIMGAIV 251

Query: 246 AAVVFGLIQVIGALISPTLAVMAPYMLLFIVLLWRPQGL 284
              + G+ + +  +  P  + +  ++++  VLL RP GL
Sbjct: 252 TGYMLGIAEGLTKVFYPEASNIVIFVIMAFVLLIRPAGL 290