Pairwise Alignments

Query, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 383 a.a., acyl-CoA dehydrogenase from Magnetospirillum magneticum AMB-1

 Score =  271 bits (693), Expect = 2e-77
 Identities = 152/377 (40%), Positives = 226/377 (59%), Gaps = 4/377 (1%)

Query: 6   ELQAALLDSLQRVVDKEIAPLAQQMDEEEKFPEHLIRIFGDMGLMQARVPEEYGGPGLDL 65
           E+   LLD+L R V + + P  +++ E++  P  +I    D+GL    +PEEYGG GL +
Sbjct: 6   EILNQLLDTLSRFVRERLVPNEERIAEDDALPAEIIAEMKDLGLFGLSIPEEYGGLGLTM 65

Query: 66  TTTCMAKELVARVSMTGAQLINQNTISFVLPLLHFGTDEQRRKWLPRVAKGGVVSSVAIT 125
               +    + + S     +   N       ++  GT+EQ++K+LPR+A G +++S A+T
Sbjct: 66  EEEVLCAFEIGQTSPAFRSIFGTNNGIGSQGIIIDGTEEQKQKYLPRLATGELIASFALT 125

Query: 126 EPHAGSDVGAMKTNAVREGDHYVVNGQKCFITMAPLADYITLFAKTGEVNRRGVDNISCF 185
           EP+AGSD  +++T A ++GDHY+VNG K FIT AP A   TL A+T + N +G   IS F
Sbjct: 126 EPNAGSDAASLRTTARKDGDHYIVNGTKRFITNAPEASIFTLMART-DPNNKGAGGISAF 184

Query: 186 IVDMKSAGITLGGSEKMMGQRGTPHADIFFDNVRVPVENRMGE-EGRGFISCMHILDLNR 244
           IV+  S G++LG  +K MGQ+G    D+ F++VRVP  N +G  EG+GF + M +LD  R
Sbjct: 185 IVEADSPGLSLGKIDKKMGQKGAHTCDVIFEDVRVPAANIIGGIEGQGFKTAMKVLDRGR 244

Query: 245 PTVAASAVGVAQGAFDIAVAYAKERKAFGKAIGEFQGLQFMLADMHIQIEAARALLYKCT 304
             ++A+ VGV++     +V YA ER  FGK IGEFQ +Q MLAD   +  AAR ++    
Sbjct: 245 LHISATCVGVSERLIRDSVKYAAERVQFGKPIGEFQLVQAMLADSRTEAYAARCMVLDAA 304

Query: 305 RAIDAGQHDRLTEMASMVKCFCTDVAMKVTTDAVQVLGGHGYIRGNHVERMMRDAKVLQI 364
           R  D G +  ++  A+  K F ++   ++   AVQV GG GYI    +ER  RD ++ +I
Sbjct: 305 RKKDQGIN--VSTEAACCKMFASEAVGRIADRAVQVHGGAGYISDYGIERFYRDVRLFRI 362

Query: 365 YEGTNQIQRMVIARRAL 381
           YEGT QIQ++VIAR  L
Sbjct: 363 YEGTTQIQQLVIARNML 379