Pairwise Alignments

Query, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 387 a.a., isovaleryl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  259 bits (662), Expect = 9e-74
 Identities = 146/368 (39%), Positives = 215/368 (58%), Gaps = 4/368 (1%)

Query: 11  RDSVRRMAERHVAPIAAEIDENDRFPTELIPVYGDIGLLQLWVPEAYGGPGANLTMVCMA 70
           RD VR      +AP AA+ID ++ FP ++   +GD+GLL + VPE YGG G       ++
Sbjct: 18  RDQVRTFVAAELAPRAAQIDHDNLFPADMWRKFGDMGLLGITVPEEYGGAGLGYLAHVVS 77

Query: 71  REEISRHSEACGLLAG-ETTMFVLPLMHFGTEAQKQRFLPIVAQGRTLTAIALSEPGAGS 129
            EEISR S +  L  G  + + V  +   GT  QK ++LP +  G  + A+A+SEP AGS
Sbjct: 78  MEEISRGSASVALSYGAHSNLCVNQINRNGTHEQKLKYLPKLISGEHIGALAMSEPNAGS 137

Query: 130 DVSAIRTRAVRDGDSYVINGQKQWCSFGSVADYIMVFAKTSDAGGVDNISPFIVDVKTMP 189
           DV +++ RA + GD YV+NG K W + G  A+  +++AKT    G   I+ FIV+ +   
Sbjct: 138 DVVSMKLRAEKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGITAFIVE-RDWK 196

Query: 190 GVSFGKKERKMGMRGAVNVPVYLDNVRVPAENMLGEEGKGFRAAMRALDLNRPAIAAASV 249
           G S   K  K+GMRG+    ++ D V VPAEN+LG+   G R  M  LD  R  ++    
Sbjct: 197 GFSRSNKFDKLGMRGSNTCELFFDGVEVPAENILGQLNGGVRVLMSGLDYERVVLSGGPT 256

Query: 250 GLAQGALDAAVAYAQQRKQFKRFISEFQGVQFMLADMAMQIQAARCLLYECTRAGDRGEW 309
           G+ Q  +D  V Y   RKQF + I EFQ +Q  +ADM  Q+ A+R  LY   +A DRGE 
Sbjct: 257 GIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAYLYAVAQACDRGET 316

Query: 310 DRLPMLASMAKCFASDMAMKVTTDAVQVLGGYGYTKDYPVERMMRDAKLNQIFEGTNQIQ 369
            R    A+    + ++ A ++  +A+Q+LGG GY  ++P  R++RDAKL +I  GT++I+
Sbjct: 317 TRKD--AAGVILYTAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGAGTSEIR 374

Query: 370 RVVIAREL 377
           R++I REL
Sbjct: 375 RMLIGREL 382