Pairwise Alignments

Query, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 383 a.a., isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas putida KT2440

 Score =  253 bits (645), Expect = 8e-72
 Identities = 151/380 (39%), Positives = 222/380 (58%), Gaps = 8/380 (2%)

Query: 1   MDFTPEEIAFRDSVRRMAERHVAPIAAEIDENDRFPTELIPVYGDIGLLQLWVPEAYGGP 60
           ++ + E+I  RD  R  A   +AP A   ++       ++   G++GLL + VPE +GG 
Sbjct: 4   LELSEEQIMIRDMARDFARGEIAPHAQAWEKAGWIDDGVVRKMGELGLLGMVVPEDFGGS 63

Query: 61  GANLTMVCMAREEISRHSEACG-LLAGETTMFVLPLMHFGTEAQKQRFLPIVAQGRTLTA 119
             +     +A EEIS    A G +++   ++   PL+ +GT  Q+Q++LP +A G  +  
Sbjct: 64  YTDYVAYALAVEEISAGCGATGAMMSIHNSVGCGPLLAYGTAEQQQQWLPRLASGEVIGC 123

Query: 120 IALSEPGAGSDVSAIRTRAVRDGDSYVINGQKQWCSFGSVADYIMVFAKTSDAGGVDNIS 179
             L+EP AGS+   +RTRA      +VING KQ+ S    A   +VFA T    G   +S
Sbjct: 124 FCLTEPQAGSEAHNLRTRAELVDGQWVINGAKQFVSNARRAGLAIVFAVTDPELGKKGLS 183

Query: 180 PFIVDVKTMPGVSFGKKERKMGMRGAVNVPVYLDNVRVPAENMLGEEGKGFRAAMRALDL 239
            F+V     PG    + E KMG+R +    V  DN R+PA N+LGE GKG   A+  L+ 
Sbjct: 184 AFLVPTDN-PGFKVDRSEHKMGIRASDTCAVTFDNCRIPAANILGERGKGLAIALSNLEG 242

Query: 240 NRPAIAAASVGLAQGALDAAVAYAQQRKQFKRFISEFQGVQFMLADMAMQIQAARCLLYE 299
            R  IAA ++G+A+ A +AA+ Y++ R QF + I+E Q +  +LADM +Q+ AAR L+  
Sbjct: 243 GRIGIAAQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQVNAARLLILH 302

Query: 300 CTRAGDRGEWDRLPML--ASMAKCFASDMAMKVTTDAVQVLGGYGYTKDYPVERMMRDAK 357
             R    G+    P L  AS AK FAS+MA +V + A+QV GGYGY +DYPVER  RDA+
Sbjct: 303 AARLRSAGK----PCLSEASQAKLFASEMAERVCSMAIQVHGGYGYLEDYPVERYYRDAR 358

Query: 358 LNQIFEGTNQIQRVVIAREL 377
           + QI+EG+++IQR++IAREL
Sbjct: 359 ITQIYEGSSEIQRMLIAREL 378