Pairwise Alignments

Query, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  277 bits (708), Expect = 4e-79
 Identities = 157/375 (41%), Positives = 224/375 (59%), Gaps = 8/375 (2%)

Query: 6   EEIAFRDSVRRMAERHVAPIAAEIDENDRFPTELIPVYGDIGLLQLWVPEAYGGPGANLT 65
           E+    D+VR  A+  + P A + D++ RFP E I    ++GL  + VPE +GG      
Sbjct: 6   EQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDTGYV 65

Query: 66  MVCMAREEISRHSEACG-LLAGETTMFVLPLMHFGTEAQKQRFLPIVAQGRTLTAIALSE 124
              MA EEI+    AC  +++   ++  +P++ FG E QK++FL  +A G  L A AL+E
Sbjct: 66  AYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFALTE 125

Query: 125 PGAGSDVSAIRTRAVRDGDSYVINGQKQWCSFGSVADYIMVFAKTSDAGGVDNISPFIVD 184
           P AGSD S+++TRA  +GD YV+NG KQ+ + G  A  ++VFA T    G   IS FIV 
Sbjct: 126 PQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAFIVP 185

Query: 185 VKTMPGVSFGKKERKMGMRGAVNVPVYLDNVRVPAENMLGEEGKGFRAAMRALDLNRPAI 244
             + PG    + E K+G   +    +  DNV+VP  N LG EG+G++ A+  L+  R  I
Sbjct: 186 TDS-PGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRIGI 244

Query: 245 AAASVGLAQGALDAAVAYAQQRKQFKRFISEFQGVQFMLADMAMQIQAARCLLYECTRAG 304
           A+ +VG+A+ A + A  YA +R+ F + + E Q V F LADMA +I  AR ++       
Sbjct: 245 ASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAALR 304

Query: 305 DRGEWDRLPML--ASMAKCFASDMAMKVTTDAVQVLGGYGYTKDYPVERMMRDAKLNQIF 362
           D G     P L  ASMAK FAS+MA KV +DA+Q LGGYGY  D+P+ER+ RD ++ QI+
Sbjct: 305 DAGR----PALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIY 360

Query: 363 EGTNQIQRVVIAREL 377
           EGT+ IQR+VIAR L
Sbjct: 361 EGTSDIQRMVIARNL 375