Pairwise Alignments

Query, 580 a.a., Oxidoreductase, GMC family from Variovorax sp. SCN45

Subject, 567 a.a., choline dehydrogenase from Pseudomonas simiae WCS417

 Score =  362 bits (930), Expect = e-104
 Identities = 224/542 (41%), Positives = 297/542 (54%), Gaps = 20/542 (3%)

Query: 8   FDYVVIGAGSAGCVLANRLSADPSVRVALIEAGPSDRQFPVNLKTSLPVGNIFLLPHARY 67
           +DY+++GAGSAG  LA RL+ D  V V L+EAG  D  + ++ +T +P    F L   RY
Sbjct: 5   YDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPD--YRLDFRTQMPAALAFPLQGRRY 62

Query: 68  NWQHGFQGGAAVNGRTIACPRGKLFGGCSSVNGSVYIRGHRLDYDEWAAL-GNAGWAYED 126
           NW +       ++GR + C RGK  GG S +NG  YIRG+ +DYD WA L G   W Y D
Sbjct: 63  NWAYETDPEPHMDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLPGLENWTYLD 122

Query: 127 VLPVFRQHENRHAGATPFHAKGAGEFDVSRPNSPN-VLSQAFVQAAVQAGHAHNEDFNGA 185
            LP FR+ E R  G   +H  G G   V+ P + N  L  A V+A VQAG+   ED NG 
Sbjct: 123 CLPYFRKAETRDIGPNDWHG-GDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNGY 181

Query: 186 SQDGMGLYELNQR-DGVRLSNSRAFLHPVLGRPNLTVFADTLVEKIELKGKRAVGVRIVK 244
            Q+G G  +     +G R S +R +L     R  LT+    L +K+  +GKRAVGVR + 
Sbjct: 182 QQEGFGPMDRTVTPNGRRASTARGYLDTAKKRSTLTIVTHALTDKVLFEGKRAVGVRYLI 241

Query: 245 NDAGSERGELGERRLLSLAGAASEVVLAGGAVNSPQLLMLSGIGPGAHLRRWGIPVQLDL 304
             A  ER E         A A  EV++  GA+ SPQLL  SG+GP   L    IPV  DL
Sbjct: 242 G-AAEERVE---------ARARKEVLVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDL 291

Query: 305 PGVGQNLQDHPTVFVSHANPSGESYALSGTSWPRMLASPFRYLFNRKGMLSSNAAEAGGF 364
           PGVG+NLQDH  +++ +A     S   S   W    A    +LFN  G+ +SN  EAGGF
Sbjct: 292 PGVGENLQDHLELYLQYACTQPVSLYPS-LLWYNQPAIGAEWLFNGTGIGASNQFEAGGF 350

Query: 365 FRSLPGLDRPDVQMTFL-VGLKGNARVIPRDHGFMVLVQLLRPAGRGHLELASADAAAKP 423
            R+    + P++Q  FL V +  N     ++HGF   +  +R   RG ++L S +    P
Sbjct: 351 IRTREEFEWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPSRGRIQLKSKNPRDYP 410

Query: 424 VMHPNFLEDPADMATLVRGVREARRIFAGAALAPYSGGEIAPGPQVQTDAQLEAALREQV 483
            +  N++    D      G+R  R I    AL PY G EI+PG  VQTD QL+  +RE  
Sbjct: 411 SILFNYMATEQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDVQTDEQLDKFIREHA 470

Query: 484 NTAYHPVGTCKMGPATDPLAVVDARLRVHGIEGLRVADASVMPNIVGGNTSAPATMIGER 543
            TA+HP  +CKMG  TD +AVVD   RVHG++GLRV DAS+MP I  GN +AP  MI E+
Sbjct: 471 ETAFHPSCSCKMG--TDEMAVVDGEGRVHGMQGLRVVDASIMPIITTGNLNAPTIMIAEK 528

Query: 544 AA 545
            A
Sbjct: 529 IA 530