Pairwise Alignments

Query, 580 a.a., Oxidoreductase, GMC family from Variovorax sp. SCN45

Subject, 565 a.a., choline dehydrogenase from Pseudomonas putida KT2440

 Score =  371 bits (953), Expect = e-107
 Identities = 226/549 (41%), Positives = 305/549 (55%), Gaps = 20/549 (3%)

Query: 8   FDYVVIGAGSAGCVLANRLSADPSVRVALIEAGPSDRQFPVNLKTSLPVGNIFLLPHARY 67
           FDY+++GAGSAG  LA RL+ D  V V L+EAG  D +F  + +T +P    F L   RY
Sbjct: 5   FDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRF--DFRTQMPAALAFPLQGRRY 62

Query: 68  NWQHGFQGGAAVNGRTIACPRGKLFGGCSSVNGSVYIRGHRLDYDEWAAL-GNAGWAYED 126
           NW +       ++GR + C RGK  GG S +NG  YIRG+ +D+D WA L G   W Y D
Sbjct: 63  NWAYETDPEPYMDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTYLD 122

Query: 127 VLPVFRQHENRHAGATPFHAKGAGEFDVSRPNSPN-VLSQAFVQAAVQAGHAHNEDFNGA 185
            LP FR+ E R  G   +H  G G   V+ P + N  L  A V+A VQAG+   ED NG 
Sbjct: 123 CLPYFRKAETRDIGPNDYHG-GEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNGY 181

Query: 186 SQDGMGLYELN-QRDGVRLSNSRAFLHPVLGRPNLTVFADTLVEKIELKGKRAVGVRIVK 244
            Q+G G  +    ++G R S +R +L     RPNLT+    L +++   GKRA+GV  + 
Sbjct: 182 QQEGFGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFDGKRAIGVTYLV 241

Query: 245 NDAGSERGELGERRLLSLAGAASEVVLAGGAVNSPQLLMLSGIGPGAHLRRWGIPVQLDL 304
            D+  ER E         A A  EV+++ GA+ SPQLL  SG+GP A L    IPV  DL
Sbjct: 242 GDS-EERVE---------ARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDL 291

Query: 305 PGVGQNLQDHPTVFVSHANPSGESYALSGTSWPRMLASPFRYLFNRKGMLSSNAAEAGGF 364
           PGVG+NLQDH  +++ +A     S   S   W    A    ++FN  G+ +SN  EAGGF
Sbjct: 292 PGVGENLQDHLELYLQYACTQPVSLYPS-LLWWNQPAIGAEWMFNGTGIGASNQFEAGGF 350

Query: 365 FRSLPGLDRPDVQMTFL-VGLKGNARVIPRDHGFMVLVQLLRPAGRGHLELASADAAAKP 423
            R+ P    P++Q  FL V +  N     ++HGF   +  +R   RG +++ S D    P
Sbjct: 351 IRTRPEFKWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQVKSKDPRQHP 410

Query: 424 VMHPNFLEDPADMATLVRGVREARRIFAGAALAPYSGGEIAPGPQVQTDAQLEAALREQV 483
            +  N++    D      G+R  R I A  AL PY G EI+PG  VQTD QL+  +RE  
Sbjct: 411 SILFNYMSTEQDWQEFRDGIRLTREIMAQPALDPYRGREISPGADVQTDEQLDKFIREHA 470

Query: 484 NTAYHPVGTCKMGPATDPLAVVDARLRVHGIEGLRVADASVMPNIVGGNTSAPATMIGER 543
            TA+HP  +CKMG  TD +AVVD   RVHG++GLRV DAS+MP I+ GN +A   MI E+
Sbjct: 471 ETAFHPSCSCKMG--TDDMAVVDGEGRVHGMKGLRVVDASIMPLIITGNLNATTIMIAEK 528

Query: 544 AAAFIQQDK 552
            +  I+  K
Sbjct: 529 ISDKIRGRK 537