Pairwise Alignments

Query, 386 a.a., Acyl-CoA dehydrogenase from Variovorax sp. SCN45

Subject, 383 a.a., isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas putida KT2440

 Score =  218 bits (554), Expect = 3e-61
 Identities = 125/373 (33%), Positives = 207/373 (55%), Gaps = 3/373 (0%)

Query: 3   LNDDQRALQESARRFARERLLPDYQKREKLGVLDRKLLAEMGSLGLIGVDLPERLGGLGA 62
           L+++Q  +++ AR FAR  + P  Q  EK G +D  ++ +MG LGL+G+ +PE  GG   
Sbjct: 6   LSEEQIMIRDMARDFARGEIAPHAQAWEKAGWIDDGVVRKMGELGLLGMVVPEDFGGSYT 65

Query: 63  DAVTTGIIAEELAYGDFNISAV-PVGVSLNAAILIRHAQPEVVEEWVPRMIRGEAVVAIC 121
           D V   +  EE++ G     A+  +  S+    L+ +   E  ++W+PR+  GE +   C
Sbjct: 66  DYVAYALAVEEISAGCGATGAMMSIHNSVGCGPLLAYGTAEQQQQWLPRLASGEVIGCFC 125

Query: 122 LTEPRGGSDASNLQLKARRDGNHYIVNGEKTSITFADRADAYLIFARTGRPEDGAKGVSA 181
           LTEP+ GS+A NL+ +A      +++NG K  ++ A RA   ++FA T  PE G KG+SA
Sbjct: 126 LTEPQAGSEAHNLRTRAELVDGQWVINGAKQFVSNARRAGLAIVFAVTD-PELGKKGLSA 184

Query: 182 FFIPADTPGIQRTHFDD-VGSAIIGRGSVFFDDVKVPASHRLGDEGKGFTQVMQGFDYSR 240
           F +P D PG +    +  +G       +V FD+ ++PA++ LG+ GKG    +   +  R
Sbjct: 185 FLVPTDNPGFKVDRSEHKMGIRASDTCAVTFDNCRIPAANILGERGKGLAIALSNLEGGR 244

Query: 241 ALIALQCCGAAQASLDEAWAYAKEREAFGRPIGQFQGVSFPLAEGESHIAAVRQLSFHAL 300
             IA Q  G A+A+ + A  Y+++R  FG+PI + Q ++  LA+ +  + A R L  HA 
Sbjct: 245 IGIAAQALGIARAAFEAALVYSRDRIQFGKPINEHQSIANLLADMQVQVNAARLLILHAA 304

Query: 301 ALRDAGEPHTTEAAMVKWMGPKTAFDVIHQCLLTFGHYGWSKDLPHQQRMRDVMGLEIGD 360
            LR AG+P  +EA+  K    + A  V    +   G YG+ +D P ++  RD    +I +
Sbjct: 305 RLRSAGKPCLSEASQAKLFASEMAERVCSMAIQVHGGYGYLEDYPVERYYRDARITQIYE 364

Query: 361 GTAGIMKLVIARQ 373
           G++ I +++IAR+
Sbjct: 365 GSSEIQRMLIARE 377