Pairwise Alignments

Query, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  201 bits (511), Expect = 6e-56
 Identities = 157/524 (29%), Positives = 236/524 (45%), Gaps = 35/524 (6%)

Query: 13  CSAQRIATISGDRQRTWKEVGERVPRMAAALRSLGVRDGAFVAILAMNSDRYLELFFSVP 72
           C ++ + +     + +W+++ E+V   A AL +LGV  G  V I + N  ++  L  +  
Sbjct: 32  CDSEALVSRHQGLRYSWRQLAEQVEIYARALIALGVNTGDRVGIWSPNCAQWCILQLASA 91

Query: 73  WAGGALAPLNIRWSAVENVYALTDSNAEVLFVDDSFLDQMDFLRAER------------- 119
             G  L  +N  +   E  Y L  S    L   ++F         +              
Sbjct: 92  KVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELVPELASAAPGEL 151

Query: 120 -----PSIRHVIYMGDGPTPAGML---AYEELVAQHAPMPDADRKE----DDLYVIFYTG 167
                P +R VI +   P PAG L   A+ E   Q +      R++    D    I YT 
Sbjct: 152 ASECLPELRGVISLAANP-PAGFLPWHAFAERAGQTSVEACTARQQSLQFDQPVNIQYTS 210

Query: 168 GTTAHPKGVAMSHRGVYLATCCYLALLPSVEDLTFLYVAGYFHFAGASALWYITLAAGTH 227
           GTT  PKG  +SH  +          L        +     +H  G        +  G+ 
Sbjct: 211 GTTGAPKGATLSHYNILNNGFMVGESLGLTARDRMVIPVPLYHCFGMVMANLGCITHGST 270

Query: 228 AILPK--FEALPVMKAIGQHRVTNAVLVPTMVNMLLSHPDFKQYDLTSLKTCIYGGSPMP 285
            I P   F+A   ++A+ + R T    VPTM   +L HP     DL++L++ I  G+  P
Sbjct: 271 MIYPNDAFDAELTLRAVAEERATILYGVPTMFIAMLDHPSRAHMDLSTLRSGIMAGATCP 330

Query: 286 EGLMLRAMKMVPSWGFYQIYGMTETGGFATMLRWRDHIVSGENASRLRSAGQAGFGNEVR 345
             +M R +  +        YGMTET   +      D +       R+ + G+     E +
Sbjct: 331 IEVMRRVIDQMHMAEVQIAYGMTETSPVSLQTGPDDDL-----ELRVTTVGRTQPQLENK 385

Query: 346 VVRIEGDDADVGEIGEIIVRSDFLMMGYLNNPEATAACLRD-GWMHTGDAGYLDADGFLY 404
           +V  +G     GEIGE+  R   +M+GY +NP+ATA  +   GWMH+GD   +D  G++ 
Sbjct: 386 LVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAVMDEQGYVR 445

Query: 405 VADRVKDMIVSGGENVYSIEPERALFLHPAVREAAVIGIPSEQWGESVHAVVVLKDGASA 464
           +  R KDMI+ GGEN+Y  E E   + HPAV +A VIGIP  ++GE + A + L  G SA
Sbjct: 446 IVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHPGHSA 505

Query: 465 TAEELIAHCRTLIGGYKCPRSIEFRADPLPVTPVGKVRKNVLRD 508
           T EEL   C+  I  +K PR I F  D  P+T  GKV+K  +R+
Sbjct: 506 TVEELQGWCKARIAHFKVPRYIRF-VDEYPMTVTGKVQKFRMRE 548