Pairwise Alignments

Query, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  248 bits (633), Expect = 4e-70
 Identities = 169/506 (33%), Positives = 251/506 (49%), Gaps = 22/506 (4%)

Query: 19  ATISGDRQRTWKEVGERVPRMAAALRSLGVRDGAFVAILAMNSDRYLELFFSVPWAGGAL 78
           A I G  +R W+E  +R  R+A+AL   G+  G  VA++  N+   LE  F VP  G  L
Sbjct: 36  AVIHGAIRRNWQETYQRCRRLASALAGRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVL 95

Query: 79  APLNIRWSAVENVYALTDSNAEVLFVDDSFLDQMDFLRA--ERPSIRHVIYMGDGPTPAG 136
             LN+R  A    + L    A+VL  D  F   ++   A  E P +  V+ + D     G
Sbjct: 96  NTLNVRLDAEAIAFMLQHGEAKVLITDREFHAVIEGALALLEHPPL--VVDVDDPEYGEG 153

Query: 137 ----MLAYEELVAQHAPMPDADRKEDDLYVIF--YTGGTTAHPKGVAMSHRGVYLATCCY 190
                L YE L+ +  P    +  +D+   I   YT GTT +PKGV   HRG YL     
Sbjct: 154 RAVSQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGN 213

Query: 191 LALLPSVEDLTFLYVAGYFHFAGASALWYITLAAGTHAILPKFEALPVMKAIGQHRVTNA 250
                      +L+    FH  G    W IT  AGTH  L + +   ++  I +H+V++ 
Sbjct: 214 QMTWAMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHL 273

Query: 251 VLVPTMVNMLLSHPDFKQYDLTSLKTCIYGGSPMPEGLMLRAMKMVPSWGFYQIYGMTET 310
              P ++N L++ P+  +  +      +  G+  P  ++    +M         YG+TE 
Sbjct: 274 CGAPIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEQM--GIKVTHTYGLTEV 331

Query: 311 GGFATMLRWRDH--IVSGENASRLRSAGQAGFGNEVRVV-----RIEGDDADVGEIGEII 363
            G  T+  W D    +S E  +R++S     +     ++      ++    D   +GEI 
Sbjct: 332 YGPVTVCAWHDEWDALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIF 391

Query: 364 VRSDFLMMGYLNNPEATAACLRDGWMHTGDAGYLDADGFLYVADRVKDMIVSGGENVYSI 423
           +R + +M GYL NPEATA   R GW HTGD     ADG++ + DR+KD+I+SGGEN+ +I
Sbjct: 392 MRGNTVMKGYLKNPEATAEAFRGGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTI 451

Query: 424 EPERALFLHPAVREAAVIGIPSEQWGESVHAVVVLKDGASATAE-ELIAHCRTLIGGYKC 482
           E E AL+ H AV EAAV+  P E+WGE+  A V LK G   T E ++ + CR  + G+K 
Sbjct: 452 EVEDALYKHSAVLEAAVVARPDEKWGETPCAFVALKPGREDTREADITSWCREHLAGFKV 511

Query: 483 PRSIEFRADPLPVTPVGKVRKNVLRD 508
           P+++ F    LP T  GK++K VLRD
Sbjct: 512 PKTVVF--GELPKTSTGKIQKYVLRD 535