Pairwise Alignments

Query, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

 Score =  216 bits (550), Expect = 2e-60
 Identities = 163/509 (32%), Positives = 234/509 (45%), Gaps = 35/509 (6%)

Query: 28  TWKEVGERVPRMAAALRSLGVRDGAFVAILAMNSDRYLELFFSVPWAGGALAPLNIRWSA 87
           TW+++ + V + A AL +LGV+ G  + I A N   +    F+    G  L  +N  + +
Sbjct: 47  TWRQLADAVDQHARALMALGVQPGDRLGIWAPNCAEWCITQFASAKVGAILVNINPAYRS 106

Query: 88  VENVYALTDSNAEVLFVDDSFL-----------------DQMDFLRAER-PSIRHVIYMG 129
            E  YAL  S    +   D+F                   Q   L  ER P +R V+ + 
Sbjct: 107 SELDYALGQSGCRWVICADAFKTSDYHAMLQGLLPGLASSQPGALICERFPELRGVVSLA 166

Query: 130 DGPTPAGMLAYEELVAQHAPMP-------DADRKEDDLYVIFYTGGTTAHPKGVAMSHRG 182
             P P G LA+  L A+   +         A  + DD   I YT GTT  PKG  +SH  
Sbjct: 167 LSPPP-GFLAWHALQARAEVVSGEALAARQAQLRCDDPINIQYTSGTTGFPKGATLSHSN 225

Query: 183 VYLATCCYLALLPSVEDLTFLYVAGYFHFAGASALWYITLAAGTHAILPK--FEALPVMK 240
           +          L   E    +     +H  G        +  G+  I P   F+ L  ++
Sbjct: 226 ILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCMTHGSALIYPSDAFDPLATLR 285

Query: 241 AIGQHRVTNAVLVPTMVNMLLSHPDFKQYDLTSLKTCIYGGSPMPEGLMLRAMKMVPSWG 300
           A+ Q + T    VPTM    L HP   ++DL+SL+T I  G+  P  +M R +  +    
Sbjct: 286 AVAQEKATALYGVPTMFIAELDHPQRGEFDLSSLRTGIMAGATCPIEVMRRVIGEMHMAE 345

Query: 301 FYQIYGMTETGGFATMLRWRDHIVSGENASRLRSAGQAGFGNEVRVVRIEGDDADVGEIG 360
               YGMTET   +      D +       R+ S G+     E +VV  EG+    GEIG
Sbjct: 346 VQIAYGMTETSPVSLQTGAADDL-----ERRVTSVGRTQPRLESKVVDAEGNTVPRGEIG 400

Query: 361 EIIVRSDFLMMGYLNNPEATAACL-RDGWMHTGDAGYLDADGFLYVADRVKDMIVSGGEN 419
           E+  R   +M+GY NNP+ATA  +  +GWMHTGD   +D  G++ +  R KDMI+ GGEN
Sbjct: 401 ELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGEN 460

Query: 420 VYSIEPERALFLHPAVREAAVIGIPSEQWGESVHAVVVLKDGASATAEELIAHCRTLIGG 479
           +Y  E E   F HPAV +  VIG+P  ++GE + A V L  G + +  EL    R  I  
Sbjct: 461 IYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHAVSEVELREWARARIAH 520

Query: 480 YKCPRSIEFRADPLPVTPVGKVRKNVLRD 508
           +K PR   F  D  P+T  GKV+K  +R+
Sbjct: 521 FKVPRYFRF-VDEFPMTVTGKVQKFRMRE 548