Pairwise Alignments

Query, 304 a.a., Probable transcription regulator protein of MDR efflux pump cluster from Variovorax sp. SCN45

Subject, 299 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  265 bits (677), Expect = 1e-75
 Identities = 134/297 (45%), Positives = 191/297 (64%), Gaps = 1/297 (0%)

Query: 1   MDQIQAMRIFVRVVEAGTFTRAADSLALPKGTVTKQIQALESRLRVKLLNRTTRRVTVTP 60
           MD+I   RIF RVV+  +FTRAAD+L +P+ +V+  +Q LE R+  +LLNRTTR+V+ T 
Sbjct: 1   MDRIDLFRIFTRVVDCASFTRAADTLGIPRSSVSAAVQELEGRVGARLLNRTTRKVSPTE 60

Query: 61  DGAAYFERAARLLNDFDDMEASMTNAQANPTGRLRIDIGTSVARLVILPALATFCDRYPD 120
           DG+A++ER  RL+ D +D E       A P+GRLRID+   + RLVI PAL  F D YP 
Sbjct: 61  DGSAFYERCQRLIADVEDTENLFRQTAAQPSGRLRIDVPGRIGRLVIAPALPQFLDLYPQ 120

Query: 121 IQVDLGVSDRTVDLISDNVDCVIRAGELSDQSLVARRIGTLHFVTVASPAYIKRYGMPQH 180
           I + LGV+DR VDL+ DN+DCV+R G LSD  L+AR IG L  + VASPAY+ +YG P+ 
Sbjct: 121 IDISLGVTDRAVDLVEDNIDCVLRVGPLSDSGLIARPIGKLRLINVASPAYLAQYGAPKT 180

Query: 181 PNDIEKRHHVVSYFSGTTRRVYPHEFKKGDEQIELNGPYRVSVNESNAHIAAVLGGFGIS 240
           P+D+  RH  V+Y S ++ RV   E+ + D    +    RV+VN + A+IA  L G G+ 
Sbjct: 181 PHDL-SRHWAVNYASPSSGRVENWEWIENDALHSVPMRSRVTVNNAEAYIACCLAGLGLI 239

Query: 241 QCITFMAEPLLESGELVEVLPDWSRDPLPIHVVYPPNRHLSAKVRAFVDWAAELFAK 297
           Q   +     LESGEL+EV+P    +P+P+ ++Y   +HLS +++ F +W   L  +
Sbjct: 240 QIPAYDVRLHLESGELIEVMPGHRAEPMPMTLLYSHRQHLSRRLQVFAEWLEALLRR 296