Pairwise Alignments

Query, 398 a.a., no description from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 84.3 bits (207), Expect = 5e-21
 Identities = 66/220 (30%), Positives = 98/220 (44%), Gaps = 6/220 (2%)

Query: 35  IKIGSARAMTGLVASSFAPLYVSVKIAVEEINAKGGILGRQVEIVEADDESSPAKEPAVM 94
           +KIG A  MTG  A+         + A ++INA GG+ G ++ +V+ DD   P +  AV 
Sbjct: 29  VKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNGEKIVLVKGDDACEPKQAVAVA 88

Query: 95  RKLIDSGAQALLGPVG---SSHTIAAATTTTAAKVIHAGGGWAEELADGLKYPYHYQFTY 151
            +L+D     ++G VG   SS+TI A+     A VI    G              ++   
Sbjct: 89  NRLVDQ--DKVIGVVGHFCSSNTIPASEVYDEAGVIAITPGSTNPQVTERGLSAMFRMCG 146

Query: 152 NTGHQGEAIARLIVEKLKLKKVGILQENSGLGESGGAATVRALKKRGLEPVGTEVYPPNA 211
               QG      IV+ LK KKV +L +    G+    AT   L+KRG++PV  E      
Sbjct: 147 RDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADATKAQLEKRGVKPVLYEGLTRGE 206

Query: 212 TDLKVYLNKLRAAGADAIVLWN-SPVQGMLLTAAGLQAMK 250
            D    + K+R+ GAD +      P  G L+     Q +K
Sbjct: 207 KDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQGLK 246