Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 291 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  148 bits (374), Expect = 1e-40
 Identities = 94/286 (32%), Positives = 154/286 (53%), Gaps = 10/286 (3%)

Query: 2   WIDVVVSGLTAGSLYCLVAVGFNILYRPTKVFNFAQGDLVMVGAMASALLMTQWHWPWVP 61
           ++  + SGLT+G++Y L  +GF I+Y  + V NFAQG+ +M+G MA+A ++     P   
Sbjct: 5   FLQYLFSGLTSGAIYALAGLGFAIIYNASHVINFAQGEFIMIGGMATATMVAAGV-PIYL 63

Query: 62  AFAAAAAAVALLALLEERVAVAPVLRRSASGTGWIITTLAVAMIMTNIVGKVWGADPIVV 121
           A   A AA  L+ +  E+ A+ P   R+A     II T+  ++ M      +W  +   +
Sbjct: 64  AIPLAMAASMLVGVAMEKFAIEPA--RNADVVTIIIITIGASIFMRGAAQLIWDKEFHSL 121

Query: 122 PAPAPLSNDMLGLSAVNISSYQAALIVLTIALVAVVELLY---ASLWGKATLAVAEDRDA 178
           PA     +    ++ +  +    +L V  I+ VA+  L Y    +++GKA L  + +R A
Sbjct: 122 PA----FSGETPIAVMGATLMPQSLWVFGISAVAIALLWYFFNRTMFGKAMLGTSHNRLA 177

Query: 179 ALLRGIDPVAISRWSFALGGAFAALTGALAAPVLSASTGLGAMLLLKGFAAAAIGGLGSN 238
           A L G+    +   SFAL     A+ G +  P+   +   G ML LKGF+AA +GGLG+ 
Sbjct: 178 AQLVGVAVKRVLLASFALSALLGAVGGIVVTPITFTNYEAGIMLGLKGFSAAVLGGLGNG 237

Query: 239 RGALLAGYLIGMAEAASALLLSPGYHNAVMLVLVLAVLLAKPGGLF 284
            GA++ G ++G+AEA ++  LS  Y +A+  +++L VL   P GLF
Sbjct: 238 TGAIIGGLIVGIAEAMASGYLSSAYKDAIAFIIILFVLFFMPSGLF 283