Pairwise Alignments

Query, 600 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  180 bits (456), Expect = 7e-50
 Identities = 98/253 (38%), Positives = 150/253 (59%), Gaps = 1/253 (0%)

Query: 341 VQRLSLAVQDLHKQFGGVAALQGCALVAEAGSTHALVGPNGSGKTTTLNVISGFIRSDSG 400
           + R  L V  L  +FGG+ A+ G AL  +     AL+GPNG+GKTT  N ++GF +   G
Sbjct: 1   MSREILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGG 60

Query: 401 AVLIGGTDVSGRAPHRIARLGVGRTFQTPKLLHDLSVRDNVRLGGFASERASAFEILFGL 460
            +L+ G  + G A H+IAR GV RTFQ  +L  +++  +N+ +        + F  LF  
Sbjct: 61  TILLDGQPIQGLAGHQIARKGVVRTFQNVRLFKEMTALENLLIAQHRHLNTNFFAGLFKT 120

Query: 461 PRARQDQRDGSAAAMTLLRFVGLAERADDLAGDLPHGQQRLVEIARAMAGRPSLLLLDEP 520
           P  R+ +++    A   L  V L E A+  AG L +GQQR +EIAR M  +P +++LDEP
Sbjct: 121 PSFRRSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIMLDEP 180

Query: 521 AAGLSMDELDRLGALIEAI-AALGTTVLVVEHHLELIARISRSVTVLDRGRVLTAGTPQQ 579
           AAGL+  E + L ALI  +  +   TVL++EH ++L+  IS  + V+++G  L  GTP+Q
Sbjct: 181 AAGLNPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGTPEQ 240

Query: 580 VFSHPEVERAYMG 592
           +  +P+V +AY+G
Sbjct: 241 IRDNPDVIKAYLG 253