Pairwise Alignments

Query, 600 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 263 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Azospirillum sp. SherDot2

 Score =  194 bits (492), Expect = 5e-54
 Identities = 103/249 (41%), Positives = 148/249 (59%)

Query: 346 LAVQDLHKQFGGVAALQGCALVAEAGSTHALVGPNGSGKTTTLNVISGFIRSDSGAVLIG 405
           LAV +L + FGG+ A++   +  +AG    L+GPNG+GKTT  N++ G +   SG++   
Sbjct: 11  LAVSNLTRIFGGLTAVRDVTMTVQAGEVVGLIGPNGAGKTTLFNMLGGSLPPSSGSIRFA 70

Query: 406 GTDVSGRAPHRIARLGVGRTFQTPKLLHDLSVRDNVRLGGFASERASAFEILFGLPRARQ 465
           GTD +G   H + + GV RTFQ   L   L+  DNVR   F + RA     +   P  R+
Sbjct: 71  GTDCTGAPSHVMGQRGVSRTFQITSLFPSLTALDNVRSAAFRTTRAGWGAAILRSPAYRR 130

Query: 466 DQRDGSAAAMTLLRFVGLAERADDLAGDLPHGQQRLVEIARAMAGRPSLLLLDEPAAGLS 525
           ++ +    A+ +L F  L  RAD LA  + +G+QR +EIA A+A  P LLLLDEPAAG++
Sbjct: 131 EEAELRRKALEILAFCDLDHRADTLADAMSYGEQRRLEIAIALAAEPRLLLLDEPAAGMN 190

Query: 526 MDELDRLGALIEAIAALGTTVLVVEHHLELIARISRSVTVLDRGRVLTAGTPQQVFSHPE 585
            +E  RL  +I  I A G TVL+VEHH+ ++A +   + VLD G  +  G P +V + PE
Sbjct: 191 PEEGQRLVEMIRRIRARGVTVLLVEHHMRVVASVCDRLVVLDHGVKIAEGPPAKVLNDPE 250

Query: 586 VERAYMGRE 594
           V R Y+GRE
Sbjct: 251 VIRVYLGRE 259