Pairwise Alignments

Query, 278 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 238 a.a., high-affinity branched-chain amino acid transporter, ATP-binding from Pseudomonas putida KT2440

 Score =  179 bits (454), Expect = 5e-50
 Identities = 99/242 (40%), Positives = 160/242 (66%), Gaps = 11/242 (4%)

Query: 5   LSIENIEVVYNHSVQALRGLSIEVPDGKIVALLGSNGAGKTSTLKAASGVLPFEKGRIAA 64
           L +++++V Y   +QAL+ +S+ + +G+ V+L+G+NGAGK++ L +  G     + R A+
Sbjct: 6   LELKDLDVFYG-PIQALKKVSMHINEGETVSLIGANGAGKSTLLMSIFG-----QPRAAS 59

Query: 65  GRIGFFGEDIAGRPAYQLARQGMAHVREGRHIFGDLTVEENLVAAANALTGRDKRERGDV 124
           G I + G DI  + ++ +A  G+A   EGR +F D+TVEENL+     +  +      D 
Sbjct: 60  GHIVYRGTDITRKSSHYIASNGIAQSPEGRRVFPDMTVEENLMMGTIPIGDK----HADE 115

Query: 125 DPELVFGYFPRLRERRKQVAGYLSGGEQQMLAIGRAIVGKPRLILLDEPSLGLAPLVVQD 184
           D + ++  FPRL+ERR Q A  +SGGEQQMLAI RA++ +P+L+LLDEPSLGLAP+VV+ 
Sbjct: 116 DMQRMYELFPRLKERRNQRAMTMSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPIVVKQ 175

Query: 185 IFGIIARINREQGVAMLLVEQNAHVALRVAHAGYIMESGRIVISGETSKLLGDPDVQRFY 244
           IF  +  +  + G+ + LVEQNA+ AL+++   Y+M +G+I ++G   +LL + +V+  Y
Sbjct: 176 IFSTLREL-AKTGMTIFLVEQNANHALKLSDRAYVMVNGQIRMTGTGQELLVNEEVRNAY 234

Query: 245 LG 246
           LG
Sbjct: 235 LG 236