Pairwise Alignments

Query, 278 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 233 a.a., high-affinity branched-chain amino acid transporter, ATP binding from Pseudomonas putida KT2440

 Score =  200 bits (508), Expect = 3e-56
 Identities = 111/244 (45%), Positives = 158/244 (64%), Gaps = 15/244 (6%)

Query: 5   LSIENIEVVYNHSVQALRGLSIEVPDGKIVALLGSNGAGKTSTLKAASGVLPFEKGRIAA 64
           L  EN+   Y   +QAL  +++E+  G+IV L+G+NGAGK++ L    G       +  +
Sbjct: 2   LKFENVSTFYG-KIQALHSVNVEINQGEIVTLIGANGAGKSTLLMTLCG-----SPQAHS 55

Query: 65  GRIGFFGEDIAGRPAYQLARQGMAHVREGRHIFGDLTVEENLVAAANALTGRDKRERGDV 124
           G I + GE++ G+P+  + R+ +A V EGR +F  LTVEENL        G    ++GD 
Sbjct: 56  GSIKYLGEELVGQPSSHIMRKSIAVVPEGRRVFARLTVEENLAM------GGFFTDKGDY 109

Query: 125 DPEL--VFGYFPRLRERRKQVAGYLSGGEQQMLAIGRAIVGKPRLILLDEPSLGLAPLVV 182
             +L  V   FPRL+ER  Q  G +SGGEQQMLAIGRA++ KP+L+LLDEPSLGLAP+++
Sbjct: 110 QEQLDKVLQLFPRLKERYIQRGGTMSGGEQQMLAIGRALMSKPKLLLLDEPSLGLAPIII 169

Query: 183 QDIFGIIARINREQGVAMLLVEQNAHVALRVAHAGYIMESGRIVISGETSKLLGDPDVQR 242
           Q IF II ++ R+ GV + LVEQNA+ AL++A   Y++E+GR+V+ G    LL DP V+ 
Sbjct: 170 QQIFDIIEQLRRD-GVTVFLVEQNANQALKIADRAYVLENGRVVMQGTGEALLTDPKVRD 228

Query: 243 FYLG 246
            YLG
Sbjct: 229 AYLG 232