Pairwise Alignments

Query, 401 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 418 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 60.5 bits (145), Expect = 9e-14
 Identities = 82/348 (23%), Positives = 138/348 (39%), Gaps = 15/348 (4%)

Query: 26  AAFAQAHKGDIVVGAAQPITGVFAFAGLAMNNGLADYIDWKNANGGIAGHKLRYVAEDSG 85
           +A AQA    +       ++  + F    +     DY    N  GGI GH +  + +D G
Sbjct: 21  SAQAQAPAQPVKFALCYDLSKSYGFVTPQIAQAANDYAKILNQKGGIEGHPIEILVQDHG 80

Query: 86  FKVDQSAAIFKKIMASEKPSFFYCDGTPSVKAVAQDAIASNHVMTSSTSLAISVADPVKM 145
            +  +    ++K+      +F +   TP  +AV   A+A  +VM  S        D    
Sbjct: 81  NEPQRGIECYEKMKREGAVAFDFL-STPVSRAVLPRAMADGNVMVQSFVGRGDAVDGDVF 139

Query: 146 PHHFVPGATYPRLHEILMEHIARTSQGAAAKPRIAYVYADTEFGRDGIPGGKARAEKLGL 205
              F  G TY       + +I   S       +I+++Y D  FG++ I      A K G 
Sbjct: 140 KWIFPIGPTYWGQMANNIHYIKTKSNNNLKGVKISFIYPDYPFGQEPIGVLTTLAAKEGF 199

Query: 206 PIVAEIVTKQSGVDVTTEVAQLRRAKPDIVIFQGYILAPMPEFV-RQMREAGL-NPQIMG 263
            +   +     G D     +Q+RR  PD VI   + LA M     R+M+  G+   + + 
Sbjct: 200 DLQL-VPNPMPGNDQAAAWSQIRRNNPDWVI--SWNLAGMHVVASREMKRNGIPMDKYIS 256

Query: 264 TAW--GLDKPAYDALAALGVRLTGVSMYRYGHETDSPMIKAMRDHAAKARPDMKFISPFY 321
             W   +D        A G++          H     +IK + +   K   D K ++  Y
Sbjct: 257 VNWLNEVDLANIGLENAKGLKRGTNVTGGQSHPLIQQIIKDLYE-KNKGSGDRKHLNDVY 315

Query: 322 VSSWLSGMVFGEIAERCLKANK----PLVLPNMKAALESMKDWDSGGV 365
            ++ L+  ++  + E    A K    PL    MK  LES+K++D+ G+
Sbjct: 316 YNTGLA--IYASVFEGARLAIKQSGWPLNPDKMKRGLESLKNFDAEGL 361