Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 354 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  178 bits (452), Expect = 2e-49
 Identities = 116/335 (34%), Positives = 173/335 (51%), Gaps = 15/335 (4%)

Query: 23  RTWMAAFVLSLFT----LPLWGSDYVLAMACIVGIHV-IAALGLNLTTGNAGLISLSHGA 77
           R W     L L      LP  G+DY L    I  + + +A LGLN+ TG  G  S+    
Sbjct: 22  RRWPVGLPLLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNVLTGYTGQTSVGAAG 81

Query: 78  FIGVGCYTV--AWLGKQGVPFYIALPVAGFVAAFLGVIVGLPSLRVKGLYLAIATLAAHF 135
           F+ VG +      L   G+P  +AL   G +A  +G++ G+PS R+KG YL + TLAA F
Sbjct: 82  FMAVGAFATYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYLMVTTLAAQF 141

Query: 136 ILSFAFREWD-AVTGGVSGT-SIPRANLFGFELVGDRRNFYLIFVCAFAMAVAARNLART 193
            L + F ++        SGT S PR  LF   L      + L   C   +   A NL R+
Sbjct: 142 FLEWVFAKFPWFYNHASSGTISAPRLELFSHSLASPVGRYLLTLSCVVLLTWVAVNLVRS 201

Query: 194 HIGRAFVAVRDRDISAEILGVHLLRTKLTAFAIGAFYAGVAGGLLGYFY-GSITPDYFVL 252
            +GR ++A+RD D +A ++G+ + R K  AFA+ +FY G+AG L  + Y G+ +   F +
Sbjct: 202 QVGRNWMAIRDMDTAASVIGIPVERYKRLAFAVSSFYLGIAGALWAFAYLGTSSAGSFDI 261

Query: 253 TLSVFYLAAVIVGGLGTVLGSVLGAVFMTFVPEGLRLLASVSSQAFPG--VAGLLLPMGQ 310
             S   L  +I+GG+G++ G+ +GA F++  P    LL+      F G   AG L  + +
Sbjct: 262 NRSFQILFIIIIGGMGSIAGNFIGAAFISLTP---ILLSHAGQWLFGGNVDAGQLQNLQK 318

Query: 311 VVFGLLIIVFLIFEPHGLAAIWARVRRSFHLWPFK 345
           ++FG LII FLI EP GL  +   +R    +WP +
Sbjct: 319 ILFGCLIIWFLIKEPEGLVRLLGDLRERIRVWPLR 353