Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  140 bits (354), Expect = 3e-38
 Identities = 85/285 (29%), Positives = 152/285 (53%), Gaps = 3/285 (1%)

Query: 1   MSEFLEYSLLGLLSGGVMALIALSFVLIYKGTGVVNFAVGEVMMLGAYIYYAGAVTFGLP 60
           M   ++  L G+L G + A+I++   LI+    VVNFA GE +M+G Y  Y  A  FGL 
Sbjct: 1   MEVLIQLVLNGILLGSMYAIISVGLTLIFGIVRVVNFAHGEFLMVGMYAAYLLAAKFGLH 60

Query: 61  PWVAFALALAVIGVLAIAIERAVLRPLSGQPAVAVLMATIGMASIVHGGVEAVWGGDTLS 120
           P+ A    + ++  +  A++R +++PL G      + AT+G+++ +      V+G D  S
Sbjct: 61  PYAAAVPIVILLFAIGAAVQRFLIQPLLGAEEHIQIFATVGLSTALVNLALLVFGADLYS 120

Query: 121 -PPTLLPRTPLLLGEVLIPGTVLGNFAVAAVLIGGFLAFFRYSKTGIALRATASDPVTAA 179
            PP+    T ++ G  L+ G ++  F  A  L+ G   F + +  G A+RATA +   A 
Sbjct: 121 IPPSAAQGTVMVGGFSLVKGQLV-MFVCALALVAGLHLFMQSTALGRAIRATAQNRTAAL 179

Query: 180 TLGININYAQRLTWLLSGLVGTFAGVLIASSAGLSPLLAS-AALSVFAAIILGGLDSILG 238
            +G+ ++    + + +       A  L+     ++P + +   L+ F  ++LGG+ S+ G
Sbjct: 180 LMGVKVDQIYVIAFGIGAACVGLASALVMPLYPVTPTIGTYFVLTAFVVVVLGGMRSMYG 239

Query: 239 AIVASLLIGWVESVSAGYLGGKSRDVVPYVVVLAILVVKPYGMFG 283
           A   +++IG V+S+S  Y+    ++VV + + LAIL+ KP G+FG
Sbjct: 240 AFFGAMIIGLVDSLSGYYIAPDLKEVVYFAIFLAILIFKPTGLFG 284