Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  130 bits (327), Expect = 4e-35
 Identities = 87/300 (29%), Positives = 147/300 (49%), Gaps = 13/300 (4%)

Query: 4   FLEYSLLGLLSGGVMALIALSFVLIYKGTGVVNFAVGEVMMLGAYIY--------YAGAV 55
           FL+  + GL  G V  LIA+ + ++Y   G++NFA GEV M+ AY+         Y G  
Sbjct: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVE 64

Query: 56  TFGLPPWVAFALALAVIGVLAIAIERAVLRPLSGQPAVAVLMATIGMASIVHGGVEAVWG 115
           +F L         + V GV    IER   +PL     +A L++ IG++ I+    +   G
Sbjct: 65  SFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQG 124

Query: 116 GDTLSPPTLLPRTPLL-LGEVLIPGTVLGNFAVAAVLIG-GFLAF-FRYSKTGIALRATA 172
                 PTLL     + +G   +  T    F + A  +G G L +  +Y+K G   RAT 
Sbjct: 125 ARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQ 184

Query: 173 SDPVTAATLGININYAQRLTWLLSGLVGTFAGVLIASSAGLSPLLASAALSV--FAAIIL 230
            D   A+ LGIN +      +++  ++   AGVLI  + G     A   + +  F A +L
Sbjct: 185 QDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAVL 244

Query: 231 GGLDSILGAIVASLLIGWVESVSAGYLGGKSRDVVPYVVVLAILVVKPYGMFGTRTIERL 290
           GG+ S+ GA++  +++G  ES+ +G +    +DV  + +++ IL+ +P G+ G   + ++
Sbjct: 245 GGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPLVAKV 304