Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  195 bits (496), Expect = 9e-55
 Identities = 114/294 (38%), Positives = 169/294 (57%), Gaps = 5/294 (1%)

Query: 1   MSEFLEYSLLGLLSGGVMALIALSFVLIYKGTGVVNFAVGEVMMLGAYIYYAGAVTFGLP 60
           M+ F E  + GLL+G + +L+A+ FVLIYK +GV NFA G  M+L A + +   +  G+P
Sbjct: 1   MAFFFEVLIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQG-AMVLFAALTFVSLLERGVP 59

Query: 61  PWVAFALALAVIGVLAIAIERAVLRPLSGQPAVAVLMATIGMASIVHGGVEAVWGGDTLS 120
            W++F + LA +  LA+ IERAVLRPL G+  + + MAT+G+A I+ G  +A+WG     
Sbjct: 60  FWLSFLVTLATMIALALLIERAVLRPLVGRSPITLFMATLGLAYIIEGAAQALWGAQVHG 119

Query: 121 PPTLLPRTPLLLGEVLIPGTVLGNFAVAAVLIGGFLAFFRYSKTGIALRATASDPVTAAT 180
               +   PL LG +L+    L   A AA L+      F  ++ G+ALRA A DP  A +
Sbjct: 120 LELAISDAPLELGGLLLSQFDLFAAATAAALVVLLSLLFNRTRIGLALRAVADDPRAAMS 179

Query: 181 LGININYAQRLTWLLSGLVGTFAGVLIASSAGLSPLLASAALSVFAAIILGGLDSILGAI 240
           +GI +     + W ++G VG  AG+L  +  G+   L+   L     +I+GG  SI GAI
Sbjct: 180 VGIRLPRVWAVVWAVAGFVGLVAGLLWGARLGVQFSLSLVVLKALPVLIIGGFTSISGAI 239

Query: 241 VASLLIGWVESVSAGY----LGGKSRDVVPYVVVLAILVVKPYGMFGTRTIERL 290
           V  L+IG  E ++  Y    +GG   +  PYV+ L  L+V+P G+FG R IER+
Sbjct: 240 VGGLIIGASEKLAEVYFGPLIGGGIENWFPYVLALLFLLVRPAGLFGERAIERV 293