Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  180 bits (456), Expect = 4e-50
 Identities = 108/294 (36%), Positives = 167/294 (56%), Gaps = 5/294 (1%)

Query: 1   MSEFLEYSLLGLLSGGVMALIALSFVLIYKGTGVVNFAVGEVMMLGAYIYYAGAVTFGLP 60
           M+ FLE  + GLL+G + +L+A+ FVLIYK +GV NFA G  M+L A + +      GLP
Sbjct: 1   MNFFLETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQG-AMLLFAALTFVSLHEQGLP 59

Query: 61  PWVAFALALAVIGVLAIAIERAVLRPLSGQPAVAVLMATIGMASIVHGGVEAVWGGDTLS 120
             +A AL + V+ V A+ IER VLRPL  +  + + MAT+G++ I+ G  + + G    +
Sbjct: 60  FALALALTVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGLMGAQVRA 119

Query: 121 PPTLLPRTPLLLGEVLIPGTVLGNFAVAAVLIGGFLAFFRYSKTGIALRATASDPVTAAT 180
               +   PL +GE++I    L    V+A+L+      F  ++ G+ALRA A D   A +
Sbjct: 120 LDLGIEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAALS 179

Query: 181 LGININYAQRLTWLLSGLVGTFAGVLIASSAGLSPLLASAALSVFAAIILGGLDSILGAI 240
           LGIN+N   ++ W ++G+VG  AG+L  +  G+   L+   L     +I+GG  SI GAI
Sbjct: 180 LGINLNRIWQIVWAVAGMVGLVAGLLWGARQGVQFSLSLVVLKALPVLIIGGFTSIGGAI 239

Query: 241 VASLLIGWVESVSAGY----LGGKSRDVVPYVVVLAILVVKPYGMFGTRTIERL 290
           V  L++G  E+++  Y    +GG       Y + L  L ++P G+FG R IER+
Sbjct: 240 VGGLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLFGDRAIERV 293