Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 307 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

 Score =  128 bits (322), Expect = 1e-34
 Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 14/301 (4%)

Query: 4   FLEYSLLGLLSGGVMALIALSFVLIYKGTGVVNFAVGEVMMLGAYIYY---AGAVTFGLP 60
           F +  + GL  G   ALIA+ + ++Y   G++NFA GEV M+G+Y+ +   AG    G+ 
Sbjct: 7   FFQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIH 66

Query: 61  PW-----VAFALALAVIGVLAIAIERAVLRPLSGQPAVAVLMATIGMASIVHGGVEAVWG 115
                  VAF   + V      +IER   RPL     +  L++ IGM+  +   V     
Sbjct: 67  SLPILMTVAFVATIFVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNTVLLSQD 126

Query: 116 GDTLSPPTLLPRT----PLLLGEVLIPGTVLGNFAVAAVLIGGFLAFFRYSKTGIALRAT 171
               S P L+P +    P    EVLI    +  F V  V +     F   S+ G A RA 
Sbjct: 127 SKDKSIPNLIPGSFSFGPGGAEEVLISYMQILVFVVTLVAMTLLTLFISRSRLGRACRAC 186

Query: 172 ASDPVTAATLGININYAQRLTWLLSGLVGTFAGVLIASSAGLSPLLAS--AALSVFAAII 229
           A D   A  LGIN N    LT+++   +   A VL++   G+    A     L  F A +
Sbjct: 187 AEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAFTAAV 246

Query: 230 LGGLDSILGAIVASLLIGWVESVSAGYLGGKSRDVVPYVVVLAILVVKPYGMFGTRTIER 289
           LGG+ SI GA++  L++G  E+  A   G + +DVV + +++ +L+ +P G+ G   +E+
Sbjct: 247 LGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEVEK 306

Query: 290 L 290
           +
Sbjct: 307 V 307