Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Dickeya dianthicola ME23

 Score =  135 bits (341), Expect = 9e-37
 Identities = 91/303 (30%), Positives = 160/303 (52%), Gaps = 18/303 (5%)

Query: 4   FLEYSLLGLLSGGVMALIALSFVLIYKGTGVVNFAVGEVMMLGAYIYY---AGAVTFGLP 60
           FL+    G+  G   ALIA+ + ++Y   G++NFA GEV M+G+Y+ +   A  +  G+ 
Sbjct: 8   FLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGID 67

Query: 61  P-WV----AFALALAVIGVLAIAIERAVLRPLSGQPAVAVLMATIGMASIVHGGVEAVWG 115
             W+    AF  A+ +      +IER   +P+     +  L++ IGM+  +   V    G
Sbjct: 68  AGWLLIGAAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQG 127

Query: 116 GDTLSPPTLLPRTPLLLGEVLIPGTVLGNFAVAAVLIGGFLA------FFRYSKTGIALR 169
              ++ P+L+     +LGE       L +  +  + I  FLA      F RYS+ G A R
Sbjct: 128 SRDVALPSLI-HGQWVLGESNGFAATLSSMQLT-IWIVTFLAMLALTLFIRYSRMGRACR 185

Query: 170 ATASDPVTAATLGININYAQRLTWLLSGLVGTFAGVLIASSAG-LSPLLA-SAALSVFAA 227
           A A D   A+ LGI+ +    LT+++  ++   AGVL+    G ++P +   A +  F A
Sbjct: 186 ACAEDLKMASLLGISTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPYIGFMAGMKAFTA 245

Query: 228 IILGGLDSILGAIVASLLIGWVESVSAGYLGGKSRDVVPYVVVLAILVVKPYGMFGTRTI 287
            +LGG+ SI GA++  L++G  E++++ YL  + +DVV + +++ +L+V P G+ G   +
Sbjct: 246 AVLGGIGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSFALLIVVLLVMPTGILGRPEV 305

Query: 288 ERL 290
           E++
Sbjct: 306 EKV 308