Pairwise Alignments

Query, 274 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 274 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  197 bits (501), Expect = 2e-55
 Identities = 113/267 (42%), Positives = 159/267 (59%), Gaps = 6/267 (2%)

Query: 11  SAASGGLALSVEGVDLRFGGIHALRGVSFAAAPGQVTAVIGPNGAGKTSVFNTISGFYRP 70
           S  S    L+VE V ++FGG+ A+  + F    G++ ++IGPNGAGKT+ FN ++GF +P
Sbjct: 2   STTSSSAILNVEHVGMKFGGLTAIADLHFDVHEGEILSLIGPNGAGKTTAFNIMTGFLKP 61

Query: 71  AAGRILLGDEDITHTPVHARAGRGLARTFQNIALFRGLTVLENVKLG----GHHTMQAGV 126
             GR+L    D++ T  +  A  GLARTFQ  ++F   +V +NV +G    G  T    +
Sbjct: 62  TQGRVLFRGRDLSQTRPNEIARLGLARTFQRTSVFADDSVRDNVLIGLHRFGDDTRATAL 121

Query: 127 FSALVYGRAAREEELRLRAEVERKVIDFLEIDHVRHLSVDVLPYGLQKRVELARALAMRP 186
              L    AAR  E  +R   E  +ID + +          L YG Q+ V  A ALA+ P
Sbjct: 122 LDRLFPTPAARRAENAVRERAE-AIIDMVGLSARAGDKAGSLSYGEQRLVGFALALAVEP 180

Query: 187 RVLLLDEPVAGMNREETEDMARFILDVQEEWGVTVLLVEHDMGMVMDISSHVVVLNFGQV 246
           ++LLLDEPV+GMN  ET+   R I  V++E GVT+LLVEHDM MVM++S  +V LN+G++
Sbjct: 181 KMLLLDEPVSGMNASETQGFVRLIRKVRDE-GVTILLVEHDMPMVMEVSDRIVCLNYGRL 239

Query: 247 IASGTPAEVRRHPQVIEAYLGAESEAL 273
           IA G P  +R  P+VIEAYLG  +  L
Sbjct: 240 IAEGPPEAIRTDPKVIEAYLGKSAAKL 266