Pairwise Alignments

Query, 553 a.a., Cyclohexanecarboxylate--CoA ligase from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  221 bits (564), Expect = 4e-62
 Identities = 168/545 (30%), Positives = 265/545 (48%), Gaps = 38/545 (6%)

Query: 22  LDKTPDDFLAASIDRTPDKAALVGYRADRSEPVRLSYRELGDKVTLAAGALRGLGVLPGD 81
           L +T      A++ R  D  ALV     R + +R S+R+L ++V + A AL  LGV  GD
Sbjct: 16  LTQTIGQAFDATVARCCDSEALVS----RHQGLRYSWRQLAEQVEIYARALIALGVNTGD 71

Query: 82  VVAVQVPNWWEFVVVSLACGRIGAVVNPLMPIFRERELEFMLGFAEAKVLVVPAMFRGFD 141
            V +  PN  ++ ++ LA  ++GA++  + P +R  ELE++L  +  + LV    F+  D
Sbjct: 72  RVGIWSPNCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKTSD 131

Query: 142 HAAMADSLKGRL-------------PKLQQVLVVDGQGDDAF-------DRVLLGGTARV 181
           +  M   L   L             P+L+ V+ +       F       +R    G   V
Sbjct: 132 YHTMVQELVPELASAAPGELASECLPELRGVISLAANPPAGFLPWHAFAERA---GQTSV 188

Query: 182 EPPAMASPTPSVLQPGDLSVMMFTSGTTGSPKGVMHTSNTLLACNRALSERFGLTTDDVL 241
           E       +    QP ++    +TSGTTG+PKG   +   +L     + E  GLT  D +
Sbjct: 189 EACTARQQSLQFDQPVNIQ---YTSGTTGAPKGATLSHYNILNNGFMVGESLGLTARDRM 245

Query: 242 LACSPVGHMTGYAAVMMLGIYLGSTVVL-QDIWDGKRGVALMAAEGVTYTAASSPFLSDI 300
           +   P+ H  G     +  I  GST++   D +D +  +  +A E  T           +
Sbjct: 246 VIPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGVPTMFIAM 305

Query: 301 CNAVAEGAPRPDRLRSFLCGGAPIPPVLIERAARELDL-KVCSLWGMTESLSSTL-TEPS 358
            +  +        LRS +  GA  P  ++ R   ++ + +V   +GMTE+   +L T P 
Sbjct: 306 LDHPSRAHMDLSTLRSGIMAGATCPIEVMRRVIDQMHMAEVQIAYGMTETSPVSLQTGPD 365

Query: 359 RAADKSASTDGRALDGVGIRIVDFDGKPLPPGETGRLMVRGAQMSLGYYKRPDIATYDA- 417
              +   +T GR    +  ++VD DG  +P GE G L  RG  + LGY+  P  AT DA 
Sbjct: 366 DDLELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQ-ATADAI 424

Query: 418 --EGWFDTGDLAYMDAEGYIRINGRTKDVLIRGGENVPVVEIEALLYKHPAVAMAAIVGF 475
              GW  +GDLA MD +GY+RI GR KD++IRGGEN+   E+E   Y HPAVA A ++G 
Sbjct: 425 DPAGWMHSGDLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGI 484

Query: 476 PDDRLGERACAFVELRPGATLDLAAVQAYMEACKVAKQYWPERVEVLDMVPRTPSGKIQK 535
           P  R GE   A+++L PG +  +  +Q + +A ++A    P  +  +D  P T +GK+QK
Sbjct: 485 PCSRYGEEIVAWIKLHPGHSATVEELQGWCKA-RIAHFKVPRYIRFVDEYPMTVTGKVQK 543

Query: 536 YLLKE 540
           + ++E
Sbjct: 544 FRMRE 548