Pairwise Alignments

Query, 553 a.a., Cyclohexanecarboxylate--CoA ligase from Variovorax sp. SCN45

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  177 bits (450), Expect = 7e-49
 Identities = 176/560 (31%), Positives = 259/560 (46%), Gaps = 61/560 (10%)

Query: 15  MRAASYWLDKTPDDFLAASIDRTPDKAALVG-YRADRSEPVRLSYRELGDKVTLAAGALR 73
           M AA   +  TP  F    I+RT   AA+ G Y A     +R +++E   +    A AL 
Sbjct: 9   MPAAVNHVALTPLSF----IERT---AAVYGNYPAVIHGAIRRNWQETYQRCRRLASALA 61

Query: 74  GLGVLPGDVVAVQVPNWWEFVVVSLACGRIGAVVNPLMPIFRERELEFMLGFAEAKVLVV 133
           G G+  GD VAV +PN    +         GAV+N L        + FML   EAKVL+ 
Sbjct: 62  GRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLIT 121

Query: 134 PAMFRGFDHAAMADSLKGRLPKLQQV-LVVD------GQGDDAFDRVLLGGTARVEPPAM 186
              F    HA     ++G L  L+   LVVD      G+G  A  ++          P  
Sbjct: 122 DREF----HAV----IEGALALLEHPPLVVDVDDPEYGEGR-AVSQLDYEALLNEGDPEF 172

Query: 187 ASPTPSVLQPGDLSVMMFTSGTTGSPKGVM--HTSNTLLACNRALSERFGLTTDDVLLAC 244
           A   P          + +TSGTTG+PKGV+  H    L A    ++   G     V L  
Sbjct: 173 AWEWPD--DEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRP--VYLWT 228

Query: 245 SPVGHMTGYAAVMMLGIYLGSTVVLQDIWDGKRGVALMAAEGVTYTAASSPFLSDICNAV 304
            P+ H  G+     +    G+ V L+ + D ++ + L+    V++   +   L+ + N  
Sbjct: 229 LPMFHCNGWCYPWTITALAGTHVFLRRV-DPQKILTLIREHKVSHLCGAPIVLNALVNMP 287

Query: 305 -AEGAPRPDRLRSFLCGGAPIPPVLIERAARELDLKVCSLWGMTESLSSTLTEPSRAADK 363
            A  A     +++ + G AP  P  +  A  ++ +KV   +G+TE               
Sbjct: 288 EAAKAAIEHPVQAMVAGAAP--PAKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWD 345

Query: 364 SASTDGRAL--DGVGIRIVDFDG---------KPLP-PGET-GRLMVRGAQMSLGYYKRP 410
           + S + RA      G+R    DG         +P+P  G+T G + +RG  +  GY K P
Sbjct: 346 ALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNP 405

Query: 411 DIATYDA--EGWFDTGDLAYMDAEGYIRINGRTKDVLIRGGENVPVVEIEALLYKHPAVA 468
           + AT +A   GWF TGDLA   A+GYI I  R KD++I GGEN+  +E+E  LYKH AV 
Sbjct: 406 E-ATAEAFRGGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVL 464

Query: 469 MAAIVGFPDDRLGERACAFVELRPG----ATLDLAA-VQAYMEACKVAKQYWPERVEVLD 523
            AA+V  PD++ GE  CAFV L+PG       D+ +  + ++   KV K        V  
Sbjct: 465 EAAVVARPDEKWGETPCAFVALKPGREDTREADITSWCREHLAGFKVPK------TVVFG 518

Query: 524 MVPRTPSGKIQKYLLKERVK 543
            +P+T +GKIQKY+L++R K
Sbjct: 519 ELPKTSTGKIQKYVLRDRAK 538