Pairwise Alignments

Query, 323 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  277 bits (709), Expect = 2e-79
 Identities = 153/311 (49%), Positives = 208/311 (66%), Gaps = 7/311 (2%)

Query: 4   SVAFLLVPEFQLFDMAGPLSVFQVAAEIGRGRRGPAYEVAVLSERGGRVACSAGLEMHTR 63
           SVA ++ P FQ   ++   SVF+  A + RG   PAYE  ++SE GG V  S G  ++T 
Sbjct: 3   SVALMVYPNFQSLSLSLG-SVFE-CANLLRGE--PAYEFHLVSESGGAVMTSQGFSVNTT 58

Query: 64  AWRDSQAGTVIVPGGVGARKPGAATPALMQHLRGALAAKRRVASVCTGAFLLAEAGLLDG 123
             R     T+IV G +  R P A    L++ ++ A A  RRVAS+C G F+LAEAGLL+G
Sbjct: 59  PIRPEGYDTLIVSGYLEFRLPEAN---LLELVKAASAQSRRVASLCMGIFVLAEAGLLEG 115

Query: 124 RHATTHWRQAALLQRNYPAITVDADRIFVRDGNVWSSAGIAAGIDLALAMVEADLGADTA 183
           +  TTHW  A   ++ YP I ++ D++F+ DG+VW+ AG++AG+DLALAMVE DLG+D A
Sbjct: 116 KRTTTHWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLALAMVENDLGSDLA 175

Query: 184 GAVAREMVVYHRRTGGQSQFSALQDLAPQSGRMRAVLAYIGENLTADLDIERLAEVACVS 243
             +AR++V+  RR   QSQ SAL +L P+S R++  LAY  ENLT DL +E LA+VA +S
Sbjct: 176 RRIARKLVIAQRRGSEQSQLSALLELDPKSDRVQLALAYARENLTHDLSVEALADVARLS 235

Query: 244 PRQFMRAFKAETGQTPAKAVERIRAEVARTHIEGGDSSIEAVARLTGFEDTERMRRAFVR 303
           PRQF R F+ ETGQTPAKA+E +R E AR  +E     +E VAR TGF D ERMR+AF+R
Sbjct: 236 PRQFSRVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETGFGDRERMRQAFLR 295

Query: 304 VYGQPPQALRR 314
            +GQPPQ +++
Sbjct: 296 AFGQPPQVMQQ 306