Pairwise Alignments

Query, 420 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 441 a.a., major facilitator family transporter from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 87/404 (21%), Positives = 152/404 (37%), Gaps = 35/404 (8%)

Query: 20  LVILAFGHTLSNLLRTLPAMATDVMSLDMGTTAALLGLLTGVYHLFFALGQLPAGVMLDR 79
           L ++ F  TL+ + R    +   V++ +M  TA     +   + + +A+G L  G ++D+
Sbjct: 36  LALVFFATTLNYIDRAALGIMQPVLAKEMSWTAMDYANINFWFQVGYAIGFLLQGRLIDK 95

Query: 80  LGVRTVSLSLFAMTALGCVAAALAQGPVGFFAAQALLGLGCCGMLLCPFALAARALPPAR 139
           +GV+        + +L   A  LA    GF   + +LGL                 P   
Sbjct: 96  VGVKRAFFFAVLLWSLATGAHGLATSAAGFMVCRFILGLTEAANYPACVKTVRLWFPAGE 155

Query: 140 FAMWSGLILSIGNCGMLLSATPMAWLIERHGWRASFWLAGAMA---IGIGVLVALAVPRH 196
            A+ +GL  +  N G +++   +  ++   GW+A+F   G++    +   VL       H
Sbjct: 156 RAIATGLFNAGTNVGAMVTPALLPLILAVWGWQAAFIAMGSLGLVWVVFWVLKYYNPEDH 215

Query: 197 PRTAPAPARRLKTELREV---LALTASLPLRG--PVVLAFTSLAAVLAVRGVWGGPWFMD 251
           PR   +  + ++ +       +  +  L LRG     +A+   A V      W  P+   
Sbjct: 216 PRVRQSEVQYIQQDDEPEPTRVPFSRILRLRGTWAFAVAYAITAPVFWFYLYWLPPFLNQ 275

Query: 252 --VKGLTRIEAGNALIPLTLAVAIGPLVAGALD-----RLTGARRALLAGSHLAAAGLLL 304
               G+   + G  LI + L    G +  G L      R   A  A L    + A  +L 
Sbjct: 276 QYSLGINVTQMGIPLIIIWLTADFGSIGGGILSSWLIGRGVRATTARLVSMLIFACTMLS 335

Query: 305 VVVAAAPLGRESAHGVLGSA--SFDAWVFFVFGCCMSTQP-----LLFAMGQSATA---- 353
           V+ AA   G   A   +  A  +  AW   ++   M   P      +F  G    A    
Sbjct: 336 VIFAANASGLWVAVAAISIAVGAHQAWTANIWSLVMDYTPKHLVSTVFGFGSMCAAIGGM 395

Query: 354 --RESAGKALAALNLMFFCGTAFHQLASGAIASAFGLAPVFVYF 395
              +  G  L A N  +        +    I + + LA V++YF
Sbjct: 396 FMTQIVGSVLTATNNNY-------AVLFTMIPAMYFLALVWMYF 432