Pairwise Alignments

Query, 420 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

 Score = 61.2 bits (147), Expect = 6e-14
 Identities = 103/399 (25%), Positives = 163/399 (40%), Gaps = 42/399 (10%)

Query: 23  LAFGHTLSNLLRTLPAMATDVMSLDMGTTAALLGLLTGVYHLFFALGQLPAGVMLDRLGV 82
           L F   +  +   LP +AT  M L  G T AL+GL  G Y L  A+ Q+P G++ DR+G 
Sbjct: 22  LVFAFRMLGMFMVLPVLATYGMDL-AGATPALIGLAIGAYGLTQAVLQIPFGMISDRIGR 80

Query: 83  RTVSLSLFAMTALGCVAAALAQGPVGFFAAQALLGLGCCGMLLCPFALAARALPPARFAM 142
           R V      + ALG V AA A    G  A + L G G     +    L+       R   
Sbjct: 81  RPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGAISAAVMAL-LSDLTREQHRTKA 139

Query: 143 WSGLILSIG-NCGMLLSATPMAWLIERHGWRASFWLAGAMAIGIGVLVALAVPR-----H 196
            + + +SIG +  + +   P+  L    G    F +   +A+   +L+A  VP       
Sbjct: 140 MAMIGMSIGLSFAVAMVVGPL--LTSAFGLSGLFLVTAGLALVGILLIAFVVPSTHSILQ 197

Query: 197 PRTAPAPARRLKTELR--EVLALTASLPLRGPVVLA-FTSLAAVLAVRGVWGGP----WF 249
            R +    + +   LR  ++L L  S+ +   V++A F +L      RG  G P    W+
Sbjct: 198 HRESGVARQAIGPTLRHPDLLRLDVSIFILHAVLMASFVALPLAFVERG--GLPKEQHWW 255

Query: 250 MDVKGLTRIEAGNALIPLTLAVAIGPLVAGALDRLTGARRALLAGSHLAAAGLLLVVVAA 309
           + +  L    +  A++P         ++ G   R     + +LAG   A + LLL  +  
Sbjct: 256 VYLTAL--FISFFAMVPF--------IIYGEKKR---KMKRVLAG---AVSVLLLTEI-- 297

Query: 310 APLGRESAHGVLGSASFDAWVFFVFGCCMSTQPLLFAMGQSATARESAGKALAALNLMFF 369
                E A G+ G        F  F    ++ P L +    A  +   G A+   +   F
Sbjct: 298 --YFWEWADGLRGLVIGTVVFFTAFNLLEASLPSLVSKVSPAGGK---GTAMGVYSTSQF 352

Query: 370 CGTAFHQLASGAIASAFGLAPVFVYFAVFLAVSALLFLR 408
            G A   +  G +    GL  VF+  AV  A+  ++ LR
Sbjct: 353 LGAALGGILGGWLFQHGGLNTVFLGSAVLCAIWLIVALR 391