Pairwise Alignments

Query, 381 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  108 bits (271), Expect = 2e-28
 Identities = 104/325 (32%), Positives = 144/325 (44%), Gaps = 38/325 (11%)

Query: 31  AELQAAL-WASRRHDGLDAAAEAEFQQWLAADPVHGELYDELDGSLDGVRLLPGDSIQSL 89
           A+ QAAL W +R ++    A  A F++WL ADP H   YD+       V      +  + 
Sbjct: 10  AQFQAALQWFNRINEQPGQAEGAAFKRWLLADPAHRAAYDQAQ-----VLWQKSAAPAAR 64

Query: 90  RATVQEDARARVAAVPPRRAPSPASRGSPASPGRRNWLLDLGRLVPQAALAGTAVAVVG- 148
            A  ++DA  R      R             P R  W     R V   ALA   V  VG 
Sbjct: 65  LADEEQDALQRYLDAMAR------------PPARGGW-----RRVAGLALAACLVLAVGV 107

Query: 149 -GGWLGWAHWRGQPIFEKHYATARGQSLNIDLPDGSALQLDAATQAQVRLYHDHREVRLL 207
            GGW    +W      +  Y++  GQ   + L D S + LDA +   V      R VRLL
Sbjct: 108 AGGWHP-GYWLQD--LQADYSST-GQIRQVILADQSQVTLDAGSAIAVDFAQGERRVRLL 163

Query: 208 DGQAMFIVSSNAAQPFHVLAGETRVVVVGTRFSVRHTRSGIDAGKTTVAVESGRVRVSAL 267
            G A F V+ +  +PF V A    V V+GT+F VR    G       V V SGRV VS  
Sbjct: 164 HGAAFFEVT-HTGEPFLVEAAGGEVRVLGTQFEVREQGEGAQ-----VTVRSGRVGVSPA 217

Query: 268 ASVEGAGVELTAGQGVTADDAGRLAPVVEIAAGGVAAWRQGRVSFTDTPLAQALAEFERY 327
                   ELTA Q +T   AGR+   + + +    AWRQG +++   PLAQ + +  RY
Sbjct: 218 QGTVAR--ELTANQQLTYR-AGRVGDTLAVDSDNRLAWRQGWLNYYQVPLAQVIDDLGRY 274

Query: 328 GDTGLVVRDPAVGALRLGGSFSLRE 352
               +++ D  +G  ++ GSF + E
Sbjct: 275 YPGRILLLDGDLGQRKVSGSFPVAE 299