Pairwise Alignments

Query, 381 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  126 bits (316), Expect = 1e-33
 Identities = 115/354 (32%), Positives = 159/354 (44%), Gaps = 49/354 (13%)

Query: 29  DAAELQAALWASRRHDGLDAAAEAE-FQQWLAADPVHGELYDELDGSLDGVRLLPGDSIQ 87
           DA    AA W  R H      AE E F  WLAADP H E Y  +        LLP  +  
Sbjct: 12  DAITDAAAHWCMRLHAEDCTQAEREAFADWLAADPRHAEEYQAMLEIWQTADLLPRSA-- 69

Query: 88  SLRATVQEDARARVAAVPPRRAPSPASRGSPASPGRRNWLLDLGRLVPQAALAGTAVAVV 147
                +  +  AR AA P                  RNW        P A+ A  A+AV+
Sbjct: 70  ---TVIDFNPPARHAARP------------------RNWR-------PLASAAAIALAVL 101

Query: 148 G-GGWLGWAH-WRGQPIFEKHYATARGQSLNIDLPDGSALQLDAATQAQVRLYHDHREVR 205
              GW+GW   W   P   +H+  A  +   ++L DGS +QL+  T+     Y D R+V 
Sbjct: 102 PLAGWMGWEQGWL--PNHYQHFE-AGDRMQTVELSDGSTVQLNLHTELTFLNYKDQRQVT 158

Query: 206 LLDGQAMFIVSSNAAQPFHVLAGETRVVVVGTRFSVRHTRSGIDAGKTTVAVESGRVRVS 265
           L  G+A F V  +++ PF V AG  +  V GT+F+V   +   D  K T+      V  S
Sbjct: 159 LKRGEAFFKVRHDSSHPFIVRAGSGQTRVTGTQFNVWKYQ---DQVKVTL------VEGS 209

Query: 266 ALASVEGAGVELTAGQGVTAD-DAGRLAPVVEIAA--GGVAAWRQGRVSFTDTPLAQALA 322
            L S EG+      G G+ A    G   P +E +   G   AWR G++   +  L QAL 
Sbjct: 210 VLVSSEGSAGGYRLGPGMQASYHKGDFEPQLEQSDDYGNSLAWRSGKLVLDNLSLEQALP 269

Query: 323 EFERYGDTGLVVRDPAVGALRLGGSFSLRELGTFAQALPVLLPVRLER-RGGAT 375
              RY D  L++ D + G +R+ G ++ RE+G     LP +LPV L R + G+T
Sbjct: 270 VINRYLDAPLLLADASTGRIRISGIYNTREVGRLVNNLPKVLPVYLTRSKDGST 323