Pairwise Alignments

Query, 381 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 86.7 bits (213), Expect = 8e-22
 Identities = 104/353 (29%), Positives = 147/353 (41%), Gaps = 60/353 (16%)

Query: 29  DAAELQAAL-WASRRHDGL-DAAAEAEFQQWLAADPVHGELYDELDGSLDGVRLLPGDSI 86
           D A LQAA  W +R H    DAA +A++  WL  D  H   +  ++        L G + 
Sbjct: 7   DHAVLQAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRHRLAWSYVENINQRFGGLSGQAE 66

Query: 87  QSLRA--TVQEDARARVAAVPPRRAPSPASRGSPASPGRRNWLLDLGRLVPQAALAGTAV 144
           Q+ +   +V+ D  +R                                   +A L    V
Sbjct: 67  QARQVFDSVRRDRHSR-----------------------------------RAVLGSLCV 91

Query: 145 AVVGG--GWLGWAH-WRGQP-IFEKHYATARGQSLNIDLPDGSALQLDAATQAQVRLYHD 200
           A V G  GW GW   W   P  +   Y T  G+   + L DGS L L+  T   V+    
Sbjct: 92  AGVAGVLGWGGWQRGWVDSPRAWFATYRTGLGEVRPVTLADGSQLWLNGGTALDVQFDEG 151

Query: 201 HREVRLLDGQAMFIVSSNAAQPFHVLAGETRVVVVGTRFSVRHTRSGIDAG-KTTVAVES 259
            R++RL  G+ + I S    +P  V+    RV  +GTRFSVR      D G +TT++V +
Sbjct: 152 SRQLRLYRGE-ILIESGKDPRPLSVVTRAGRVQPLGTRFSVR------DQGLQTTLSVFA 204

Query: 260 GRVRVSALASVEGAGVELTAGQGVTADDAGRLAPVVEIAAGGVAAWRQGRVSFTDTPLAQ 319
           G V+  A  S  G    L AGQ +  D     AP    A      W +G +   D PL Q
Sbjct: 205 GAVQ--ATCSGSGRQTTLQAGQMMVFDAQQVGAP--STAQRLREDWSRGVLVAEDMPLVQ 260

Query: 320 ALAEFE--RYGDTGLVVRDPAVGALRLGGSFSLRELGTFAQALPVLLPVRLER 370
            +      R+G  G+   DPA+G+LR  G+F L +       L   LP+R+ R
Sbjct: 261 MIDILRDYRHGHLGI---DPAIGSLRAVGTFPLLDTDRALAMLERALPIRVVR 310