Pairwise Alignments

Query, 1340 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 660 a.a., serine protease from Agrobacterium fabrum C58

 Score = 63.2 bits (152), Expect = 8e-14
 Identities = 67/221 (30%), Positives = 93/221 (42%), Gaps = 44/221 (19%)

Query: 677 NVTANSVSIGSLEGGGNVLIGAKSLVVGGLGTSTEVSGVISGTGGSLVKVGTGALTLSGA 736
           N+ A +   G+ +G   V + A S   GG   +   +  I+G G  LVK G+GALTLSG 
Sbjct: 477 NLVAAAGGYGAFDGDVEVTMDAAS---GGFNAADRWTNDIAGAG-RLVKSGSGALTLSGN 532

Query: 737 NTYTGGTMLRQGRLNVGSSQALGTGTLSMDDDTTLGFSADGLTIANTIHLTGQLDPIIDT 796
           NTY GGT++R G L   S+ ALGTG +              L    T+ L    D  I  
Sbjct: 533 NTYGGGTIVRDGTLVASSADALGTGGV--------------LVAGGTLSLAAGRDVAI-- 576

Query: 797 GAFSGTLSGAISGGGFITKEGTGTLTLSGANTYTGATNVAQGTLRAGAA--NTFSAASAH 854
                        GG  T+ G GTL L        A  + +  +  GA    TF   +  
Sbjct: 577 -------------GGDYTQSG-GTLVLDPQKV---ALRIKRNAVLDGATLKLTFDGGAP- 618

Query: 855 SVAAGATLDLAGFNQTLASLA--NSGTVSLAGAAAGTTLTV 893
             AAG   D+   N    + A  ++G V +     G+ L+V
Sbjct: 619 --AAGTRFDVIAANGLTGTFATIDAGNVKVRPVYTGSALSV 657



 Score = 51.6 bits (122), Expect = 2e-10
 Identities = 51/157 (32%), Positives = 61/157 (38%), Gaps = 33/157 (21%)

Query: 492 GTLVKSGQGRMELNAASTYGGGTSVVGGELHVGITGALGTGPVSVGAGTALVFNGASDAA 551
           G LVKSG G + L+  +TYGGGT V  G L      ALGTG V V  GT           
Sbjct: 517 GRLVKSGSGALTLSGNNTYGGGTIVRDGTLVASSADALGTGGVLVAGGT----------- 565

Query: 552 ALKITAGPSDPGLFNAGSVQFNDNTSAGSAQITLNGGTVGFKDNATA----GQALIDNYG 607
            L + AG                   A     T +GGT+       A      A++D   
Sbjct: 566 -LSLAAG----------------RDVAIGGDYTQSGGTLVLDPQKVALRIKRNAVLDGAT 608

Query: 608 GSVSFAGQA-TIGQATIVNHAGGETTLFGDIDAGRAK 643
             ++F G A   G    V  A G T  F  IDAG  K
Sbjct: 609 LKLTFDGGAPAAGTRFDVIAANGLTGTFATIDAGNVK 645



 Score = 40.4 bits (93), Expect = 5e-07
 Identities = 58/221 (26%), Positives = 81/221 (36%), Gaps = 57/221 (25%)

Query: 326 ISGGYA----SGHQGDPNYRAAAIVFTGGTNRLELRRDASFGGVVDASRGTNTLALGGTD 381
           I  GY     S   G  N  AAA  +      +E+  DA+ GG   A R TN +A     
Sbjct: 460 IEAGYPLLDDSNGWGRINLVAAAGGYGAFDGDVEVTMDAASGGFNAADRWTNDIA----- 514

Query: 382 DRRFDVSLIGNAGQFRGFASFEKTGTANWILDNTTTAVTPWTLRQGTLTISSDASLGDVS 441
                           G     K+G+    L    T      +R GTL  SS  +LG  +
Sbjct: 515 ----------------GAGRLVKSGSGALTLSGNNTYGGGTIVRDGTLVASSADALG--T 556

Query: 442 GKLTLDGGTLQTSQSIATSRAIAIGA----NGGAVEVDLARV---LTLNGTISGGSTGTL 494
           G + + GGTL    S+A  R +AIG     +GG + +D  +V   +  N  + G +    
Sbjct: 557 GGVLVAGGTL----SLAAGRDVAIGGDYTQSGGTLVLDPQKVALRIKRNAVLDGAT---- 608

Query: 495 VKSGQGRMELNAASTYGGGTSVVGGELHV----GITGALGT 531
                         T+ GG    G    V    G+TG   T
Sbjct: 609 -----------LKLTFDGGAPAAGTRFDVIAANGLTGTFAT 638



 Score = 29.6 bits (65), Expect = 0.001
 Identities = 43/169 (25%), Positives = 62/169 (36%), Gaps = 24/169 (14%)

Query: 307 AEGGVGVVGSNLNIVNIGVISGGYASGHQGDPNYRAAAIVFTGGTNRLELRRDASFGGVV 366
           A GG G    ++  V +   SGG+ +  +   +   A  +   G+  L L  + ++GG  
Sbjct: 481 AAGGYGAFDGDVE-VTMDAASGGFNAADRWTNDIAGAGRLVKSGSGALTLSGNNTYGGGT 539

Query: 367 DASRGT------NTLALGGTDDRRFDVSLIGNAGQFRGFASFEKTGTANWILDNTTTAVT 420
               GT      + L  GG       +SL        G    +  GT   +LD    A  
Sbjct: 540 IVRDGTLVASSADALGTGGVLVAGGTLSLAAGRDVAIGGDYTQSGGTL--VLDPQKVA-- 595

Query: 421 PWTLRQGTLTISSDASLGDVSGKLTLDGGTLQTSQSIATSRAIAIGANG 469
                   L I  +A L   + KLT DGG        A +R   I ANG
Sbjct: 596 --------LRIKRNAVLDGATLKLTFDGGA-----PAAGTRFDVIAANG 631