Pairwise Alignments

Query, 1008 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

 Score =  332 bits (852), Expect = 4e-95
 Identities = 202/505 (40%), Positives = 289/505 (57%), Gaps = 13/505 (2%)

Query: 492 VGHTLSELLPAEAVAQVMAALRDADASGHSAGRQFERRHAHDKDWFEISVSRKSIGAGED 551
           VGH  S L+  E + +V      A A          R  + DK       +   +  GE 
Sbjct: 226 VGHHFSHLVFEEDLPKVNQHFFAARAGEPQRFEARVRDESDDKQLIMDIANLPIMVNGEI 285

Query: 552 ARFIVILRNITESKRAAREIEHLAFYDTLTGLPNRRLLLDRLKRAIGATARGSRRCALLF 611
                I R+I++ K   R++   A +D LTGL NR  L DRL +A  ++ +   + A+++
Sbjct: 286 VGVFGIARDISKQKHYERQLSINASHDGLTGLLNRLSLEDRLVQACRSSRQRKVQLAVMY 345

Query: 612 LDLDNFKTLNDALGHDIGDVMLKQVAQRLQDCLREGDMVARLGGDEFVVILEDLSTQTVV 671
           +DLD FK++ND++GH  GD +L +VAQRL   +R  D V R+GGDEFVV+L DL     +
Sbjct: 346 IDLDGFKSINDSIGHYFGDQVLIEVAQRLTQQVRPADTVVRMGGDEFVVLLTDL-----L 400

Query: 672 ATSQTETMGAAILARLNKPYQL-GLQQHHSTCSIGAALFDAKNASMEEVLKQADIAMYYA 730
                  +   +LA + KPY + G+  H ST SIG  + D       ++++QAD+AMY A
Sbjct: 401 RDEDAVPVAERLLASIGKPYCIQGIDLHVST-SIGITVSDGHIEQPMKLIQQADMAMYKA 459

Query: 731 KTDGGNALRFFEAGMQTTITARATLESELHTAIADRQFVLHFQSQV-THENKVTGAEVLV 789
           K  G N  +++ + +   +    +L ++L  AI  + F LH+Q Q+     +V G E L+
Sbjct: 460 KQQGRNNFQWYTSDLNHRVCEHRSLRNDLQKAIKTQSFSLHYQPQIEARTRRVVGIEALL 519

Query: 790 RWRHPVRGLLLPHEFIDVAEDTGLIIPLGLWVLETACAQLMAWRD--DPRRRHLQLSVNV 847
           RW HPVRG + P  FI VAED+G IIPL LWVL+TACAQL   RD  D     + ++VN+
Sbjct: 520 RWEHPVRGFISPAVFIPVAEDSGQIIPLSLWVLDTACAQL---RDLCDQGFNGISMAVNI 576

Query: 848 SARQFREQDFVDQVRLVFKRTGADPRKLKLELTESLLHEKVIDAIGKMNALAALGIQFSM 907
           S   F+   FV+ ++ V  + G    +L+LE+TESLL   V  AI  ++ L  LG++ ++
Sbjct: 577 SPMHFQCGQFVECIQAVLSKHGLSAGQLELEITESLLLHNVEQAIATLHRLKDLGVRIAL 636

Query: 908 DDFGTGYSSLSYMTQLPLSQIKIDKFFVHSIGLNPKVELIIQTIIGMARNLELQIVAEGV 967
           DDFGTG+SSLSY+  LP+ +IKID+ F+  I  NP    I Q II MA +L L +VAEGV
Sbjct: 637 DDFGTGFSSLSYLKCLPIDKIKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSVVAEGV 696

Query: 968 ETQAQRDFLERHGCRVCQGYLFGRP 992
           ET  Q +FLER  C + QGY F RP
Sbjct: 697 ETAPQVNFLERGRCDILQGYYFARP 721