Pairwise Alignments

Query, 1008 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  360 bits (923), Expect = e-103
 Identities = 220/579 (37%), Positives = 315/579 (54%), Gaps = 23/579 (3%)

Query: 430  VCVYQDITEKRRHMAAIIESKAQLQATLDALPDLL----------LEVGLDGRCHGYHAP 479
            V   +DIT+++R  AA+  S+ +      + PD +          LEV  DG C      
Sbjct: 516  VTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVN-DGFCR----- 569

Query: 480  RAPVPAIDVENPVGHTLSELLPAEAVAQVMAALRDADASGHSAGRQFERRHAHDKDWFEI 539
               +     +  +GHT+ E+       Q  A L +    G    R+   R+    D   +
Sbjct: 570  ---LTGYSTDEVIGHTVYEIGIWADDKQRSALLAELRERGRVHHREMLGRNKRG-DILTV 625

Query: 540  SVSRKSIGAGEDARFIVILRNITESKRAAREIEHLAFYDTLTGLPNRRLLLDRLKRAIGA 599
             VS + I   E    ++  R++++ K A  +I HLA++D LT LPNR LL+DRL + I  
Sbjct: 626  EVSVEPITLNEVDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIAL 685

Query: 600  TARGSRRCALLFLDLDNFKTLNDALGHDIGDVMLKQVAQRLQDCLREGDMVARLGGDEFV 659
              R + R ALLFLDLD+FK +ND+LGH +GD +LK +  RL+  +R  D VARLGGDEFV
Sbjct: 686  LKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFV 745

Query: 660  VILEDLSTQTVVATSQTETMGAAILARLNKPYQLGLQQHHSTCSIGAALFDAKNASMEEV 719
            V+L  L         +   +   +   L +P  L  Q+   T SIG AL      +  ++
Sbjct: 746  VLLSGLEGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADL 805

Query: 720  LKQADIAMYYAKTDGGNALRFFEAGMQTTITARATLESELHTAIADRQFVLHFQSQV-TH 778
            LK+ADIA+Y AK  G N  + F   MQ   + R  +E++L  A+A  +  LHFQ QV   
Sbjct: 806  LKRADIALYRAKDSGRNTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDAR 865

Query: 779  ENKVTGAEVLVRWRHPVRGLLLPHEFIDVAEDTGLIIPLGLWVLETACAQLMAWRDDP-- 836
            +N++ GAEVL+RW HP  G   P +FI V E++GLI+ +G W+L+ AC        D   
Sbjct: 866  DNRIVGAEVLLRWHHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLI 925

Query: 837  RRRHLQLSVNVSARQFREQDFVDQVRLVFKRTGADPRKLKLELTESLLHEKVIDAIGKMN 896
                  L VN+S RQFR+ DFV +V           + L LE+TE ++ + + D I KM 
Sbjct: 926  DADDFNLCVNISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMC 985

Query: 897  ALAALGIQFSMDDFGTGYSSLSYMTQLPLSQIKIDKFFVHSIGLNPKVELIIQTIIGMAR 956
             L   G+ F+MDDFGTGYSSL+Y+ +LP+  +KID+ FV    ++P    I++ I+ MAR
Sbjct: 986  ELKRYGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMAR 1045

Query: 957  NLELQIVAEGVETQAQRDFLERHGCRVCQGYLFGRPQPL 995
            +L+L ++AEGVE   Q  FLER GC + QGYL  RP PL
Sbjct: 1046 SLDLAVIAEGVELTEQLAFLERLGCHLYQGYLHSRPLPL 1084