Pairwise Alignments

Query, 1008 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  356 bits (913), Expect = e-102
 Identities = 192/459 (41%), Positives = 281/459 (61%), Gaps = 3/459 (0%)

Query: 549  GEDARFIVILRNITESKRAAREIEHLAFYDTLTGLPNRRLLLDRLKRAIGATARGSRRCA 608
            G+ A ++    +I+E K + + I  LA+YD LT LPNR L  DRL  A+    R      
Sbjct: 815  GDLASYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVV 874

Query: 609  LLFLDLDNFKTLNDALGHDIGDVMLKQVAQRLQDCLREGDMVARLGGDEFVVILEDLSTQ 668
            L+FLDLD FK +ND+LGH  GD MLK +A RL  C+ + D VAR+GGDEF ++L+   T+
Sbjct: 875  LMFLDLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTR 934

Query: 669  TVVATSQTETMGAAILARLNKPYQLGLQQHHSTCSIGAALFDAKNASMEEVLKQADIAMY 728
             + A ++   +   IL  L +P+ L  ++   T SIG AL     + + +++K AD AMY
Sbjct: 935  EM-ALNRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMY 993

Query: 729  YAKTDGGNALRFFEAGMQTTITARATLESELHTAIADRQFVLHFQSQVTHENK-VTGAEV 787
            +AK  G N  +F++A M  +   R  LES+L  A+   +F+L++Q Q + + K +TGAE 
Sbjct: 994  HAKERGKNNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEA 1053

Query: 788  LVRWRHPVRGLLLPHEFIDVAEDTGLIIPLGLWVLETACAQLMAWRDDPRRRHLQLSVNV 847
            L+RWRHP RGL+ P +FI V E+ GL++ +G WVL  A  QL AW    + R  ++SVN+
Sbjct: 1054 LLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHK-AKVRVPKVSVNI 1112

Query: 848  SARQFREQDFVDQVRLVFKRTGADPRKLKLELTESLLHEKVIDAIGKMNALAALGIQFSM 907
            SARQF +     ++  + + +G  P  L+LELTES+L  +V +A+  + +L  LG+  ++
Sbjct: 1113 SARQFSDGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAV 1172

Query: 908  DDFGTGYSSLSYMTQLPLSQIKIDKFFVHSIGLNPKVELIIQTIIGMARNLELQIVAEGV 967
            DDFGTGYSSL+Y+ Q P+  +KID+ FV  +    +   I + II MA +L L ++AEGV
Sbjct: 1173 DDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGV 1232

Query: 968  ETQAQRDFLERHGCRVCQGYLFGRPQPLQVYEGELDFDT 1006
            ET  Q +FL  HGC   QGYLFGRP P   +E +   +T
Sbjct: 1233 ETHEQLEFLREHGCDEVQGYLFGRPMPAHQFEAQFSNET 1271