Pairwise Alignments

Query, 300 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 287 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

 Score =  132 bits (332), Expect = 9e-36
 Identities = 88/286 (30%), Positives = 141/286 (49%), Gaps = 17/286 (5%)

Query: 15  SDDRASPPAAAAIQAKPKRRANPLA----------STRVQSILLLAALLGAWEAAVRLFK 64
           S D   P A  AI A P      LA            RV   L +  L+  W A + +F 
Sbjct: 5   SIDTTVPGAPGAIGAPPSADPEYLAWAAARQKRIWRRRVLPALGIVGLILLWWAVIVVFG 64

Query: 65  VPQHLVPPVSDIVVALWRGLATGPLAKDGFWYHGGVTVTEILLGFLIGSGVGLAIGIVVS 124
           V   + P         W  L T    +D    +   T  E   GF++G+   + I  +  
Sbjct: 65  VKPFIAPTP-------WAVLETLYAKRDVLLDNLLPTAFEAAGGFVLGNLAAIVIATIFV 117

Query: 125 QMPKVEALLEPYVAALQSVPKVAVAPIIVVWLGFGIGSKVMIICLLTFFPVLVTSIAGFK 184
               ++ +  P V    +VP VA AP++V+ +G G+  K+ I  L+ FFP LV  + G +
Sbjct: 118 HNKTLQDIFFPVVLMFNAVPLVAKAPVLVLIMGNGVEPKITIAALVCFFPTLVNMVRGLE 177

Query: 185 AVDPDRIDLLRSLSATPWQIFRKAKFPSALPYIFAGLNMAAAFSVVGAVVGEFVGAQAGL 244
           +V+P  ++L+R LSA+  +IF + +  +ALPY+F+ L +AA+  V+GAVVGE+VGA  G+
Sbjct: 178 SVNPQAMELMRVLSASKTEIFFRLRLLNALPYLFSALRIAASMCVIGAVVGEWVGATVGI 237

Query: 245 GVLILQMEAQADTGGSFAVCVVLSVIGIVLSSLLRRIQRRVLHWMP 290
           G +ILQ     D+   +A  V+ + +  +   L+   ++ V+ W P
Sbjct: 238 GAMILQATFNFDSPLLYAAIVMSATLSGLFFLLVALAEKLVIRWQP 283